RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 HDHD3Q9BSH5 251 aaPredicted RBP7.1□□□□□ -1.27
TDP1-201ENST00000335725 NPCDR1Q9BY65 106 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 IGLV1-36A0A0B4J1U3 117 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 A8MWL6 223 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 NDUFA7O95182 113 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 RPL30P62888 115 aaKnown RBP7.1□□□□□ -1.27
TDP1-201ENST00000335725 GNG5P63218 68 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 VGLL4Q14135 290 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 LGALS9BQ3B8N2 356 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 LGALS9CQ6DKI2 356 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 DUX4L9Q6RFH8 374 aaPredicted RBP7.1□□□□□ -1.27
TDP1-201ENST00000335725 C10orf126Q8N4M7 172 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 DCAF4L2Q8NA75 395 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 STC2O76061 302 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 KISS1Q15726 138 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 ZNF295-AS1Q8N0V1 137 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 KLHDC9Q8NEP7 349 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 OR13H1Q8NG92 308 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 HOXB13Q92826 284 aaPredicted RBP7.09□□□□□ -1.27
TDP1-201ENST00000335725 URB1-AS1Q96HZ7 61 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 AP5S1Q9NUS5 200 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 SPTBP11277 2137 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 OBSL1O75147 1896 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 TCRBV4S1A1TA0A5B7 111 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 K7ERJ3 54 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 NMUP48645 174 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 PPP1CAP62136 330 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 POLR2LP62875 67 aaKnown RBP7.09□□□□□ -1.27
TDP1-201ENST00000335725 CENPWQ5EE01 88 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 C9orf153Q5TBE3 101 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 RAB42Q8N4Z0 105 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 ST8SIA1Q92185 356 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 C18orf15Q96N68 181 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 IL36RNQ9UBH0 155 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 KIAA1549Q9HCM3 1950 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 COL4A3Q01955 1670 aa7.09□□□□□ -1.27
TDP1-201ENST00000335725 FANCMQ8IYD8 2048 aa7.09□□□□□ -1.28
TDP1-201ENST00000335725 J3QLI3 93 aa7.09□□□□□ -1.28
TDP1-201ENST00000335725 FXYD3Q14802 87 aa7.09□□□□□ -1.28
TDP1-201ENST00000335725 TMEM14EPQ6UXP3 125 aa7.09□□□□□ -1.28
TDP1-201ENST00000335725 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.28
TDP1-201ENST00000335725 CHAC1Q9BUX1 264 aa7.09□□□□□ -1.28
TDP1-201ENST00000335725 C6orf106Q9H6K1 298 aaPredicted RBP7.09□□□□□ -1.28
TDP1-201ENST00000335725 C21orf62Q9NYP8 219 aa7.09□□□□□ -1.28
TDP1-201ENST00000335725 TRAV4A0A0B4J268 109 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 A8MWV9 139 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 IGFBP6P24592 240 aaPredicted RBP7.08□□□□□ -1.28
TDP1-201ENST00000335725 DGAT2L6Q6ZPD8 337 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 SUSD3Q96L08 255 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 RNASE7Q9H1E1 156 aaKnown RBP7.08□□□□□ -1.28
TDP1-201ENST00000335725 F11RQ9Y624 299 aaKnown RBP7.08□□□□□ -1.28
TDP1-201ENST00000335725 CACNA1CQ13936 2221 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 TRPM6Q9BX84 2022 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 MED12LQ86YW9 2145 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 DUSP14O95147 198 aaKnown RBP7.08□□□□□ -1.28
TDP1-201ENST00000335725 P04436 131 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 C12orf74Q32Q52 190 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 FKBP1CQ5VVH2 108 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 MMABQ96EY8 250 aaPredicted RBP7.08□□□□□ -1.28
TDP1-201ENST00000335725 AJUBAQ96IF1 538 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 EDA2RQ9HAV5 297 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 CACNG5Q9UF02 275 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 FZR1Q9UM11 496 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 V9GYY9 64 aa7.08□□□□□ -1.28
TDP1-201ENST00000335725 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 BCL3P20749 454 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 COL9A1P20849 921 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 PMVKQ15126 192 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 SHISA5Q8N114 240 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 Q96M66 194 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 ZNF747Q9BV97 191 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 IGKV1D-42A0A075B6H8 117 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 ARL14EPLP0DKL9 152 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 ZNF718Q3SXZ3 478 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 TMEM116Q8NCL8 245 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 CYYR1Q96J86 154 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 FOXQ1Q9C009 403 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 DNAJC25-GNG10A0A024R161 153 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 MBD3L4A6NDZ8 208 aaPredicted RBP7.07□□□□□ -1.28
TDP1-201ENST00000335725 MBD3L3A6NE82 208 aaPredicted RBP7.07□□□□□ -1.28
TDP1-201ENST00000335725 MBD3L5A6NJ08 208 aaPredicted RBP7.07□□□□□ -1.28
TDP1-201ENST00000335725 DSCR4P56555 118 aaPredicted RBP7.07□□□□□ -1.28
TDP1-201ENST00000335725 HERVK_113P63121 156 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 SIGLEC15Q6ZMC9 328 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 CRIPAKQ8N1N5 446 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 PIFOQ8TCI5 191 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 SCAMP4Q969E2 229 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 SPRY4Q9C004 299 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 PIGLQ9Y2B2 252 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 PAPPA2Q9BXP8 1791 aa7.07□□□□□ -1.28
TDP1-201ENST00000335725 LOC101059948A0A1B0GTJ6 334 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 NPIPB6E9PJ23 425 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 CTLA4P16410 223 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 ZDHHC23Q8IYP9 409 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 COA3Q9Y2R0 106 aaPredicted RBP7.06□□□□□ -1.28
TDP1-201ENST00000335725 EML5Q05BV3 1969 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 A0A1W2PPV9 198 aa7.06□□□□□ -1.28
TDP1-201ENST00000335725 CHEK1O14757 476 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms