RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZP1P60852 638 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 MIR17HGQ75NE6 70 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 COX14Q96I36 57 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 A6NNC1 897 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 NMBP08949 121 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 CGB7P0DN87 165 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 LINC00518Q8N0U6 118 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 ALPK2Q86TB3 2170 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 IZUMO1RA6ND01 250 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 RGPD4Q7Z3J3 1758 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 ZNF729A6NN14 1252 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-201ENST00000331920 FAM90A26D6RGX4 464 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 OR13A1Q8NGR1 328 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 IGLV3-16A0A075B6K0 115 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 SSBP2P81877 361 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-201ENST00000331920 SAP30O75446 220 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 CLPSP04118 112 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 SCRT1Q9BWW7 348 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 LAMTOR2Q9Y2Q5 125 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 PHF3Q92576 2039 aaKnown RBP13.85□□□□□ -0.19
PTCH1-201ENST00000331920 CEP290O15078 2479 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 LCNL1Q6ZST4 164 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 TMEM126AQ9H061 195 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 APOBEC3AP31941 199 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-201ENST00000331920 FAM186AA6NE01 2351 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 H3BMM0 161 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 CEACAM8P31997 349 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-201ENST00000331920 ZNF474Q6S9Z5 364 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-201ENST00000331920 UBE2WQ96B02 151 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 ZNF479Q96JC4 524 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 KLF12Q9Y4X4 402 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 PRR31Q5SQ13 230 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 NR2C2APQ86WQ0 139 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 GTSF1LQ9H1H1 148 aa13.85□□□□□ -0.19
PTCH1-201ENST00000331920 B9A039 149 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 SERF1AO75920 110 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 GSN-AS1Q9NRJ2 163 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 CDCP2Q5VXM1 449 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 C8orf46Q8TAG6 207 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 ABCA4P78363 2273 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 TRAV14DV4A0A0A6YYC5 116 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 A8MXK9 166 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 MYOD1P15172 320 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 AQP3Q92482 292 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 NRAPQ86VF7 1730 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 PRB2P02812 416 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-201ENST00000331920 C6orf226Q5I0X4 101 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 PSMG4Q5JS54 123 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 DMRTC2Q8IXT2 367 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-201ENST00000331920 NRN1Q9NPD7 142 aa13.84□□□□□ -0.19
PTCH1-201ENST00000331920 SNHG12Q9BXW3 62 aa13.83□□□□□ -0.19
PTCH1-201ENST00000331920 SRXN1Q9BYN0 137 aa13.83□□□□□ -0.19
PTCH1-201ENST00000331920 FABP5P3A8MUU1 101 aa13.83□□□□□ -0.19
PTCH1-201ENST00000331920 BSPH1Q075Z2 132 aa13.83□□□□□ -0.19
PTCH1-201ENST00000331920 C1QTNF12Q5T7M4 302 aa13.83□□□□□ -0.19
PTCH1-201ENST00000331920 LEPROTO15243 131 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 IFI27L2Q9H2X8 130 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 THADAQ6YHU6 1953 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 TRAV25A0A0B4J276 109 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 CIARTQ8N365 385 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-201ENST00000331920 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 GATAD1Q8WUU5 269 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 TMEM52Q8NDY8 209 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 GP6Q9HCN6 339 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 EFEMP2O95967 443 aa13.83□□□□□ -0.2
PTCH1-201ENST00000331920 TMEM187Q14656 261 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 ISXQ2M1V0 245 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 DPM3Q9P2X0 92 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 NPIPB13A6NJU9 1138 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 NPIPB5A8MRT5 1133 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 RCHY1Q96PM5 261 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 TRGV1A0A0A0MS02 117 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
PTCH1-201ENST00000331920 RCC1LQ96I51 464 aaKnown RBP13.81□□□□□ -0.2
PTCH1-201ENST00000331920 IMMP1LQ96LU5 166 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 GBF1Q92538 1859 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 ATP5L2Q7Z4Y8 100 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 TMEM238C9JI98 176 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 LAGE3Q14657 143 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 PILRBQ9UKJ0 227 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 hADV29S1A0JD25 119 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 TCRAP04437 139 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 H2BFSP57053 126 aa13.81□□□□□ -0.2
PTCH1-201ENST00000331920 RSPO3Q9BXY4 272 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-201ENST00000331920 CDKN1AP38936 164 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 CXCL10P02778 98 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 PEBP1P30086 187 aaKnown RBP13.8□□□□□ -0.2
PTCH1-201ENST00000331920 ASCL2Q99929 193 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 ERCC8Q13216 396 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 PKIBQ9C010 78 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 LINC00527Q9UJ94 153 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 TRAV12-1A0A0B4J245 112 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 SPSB2Q99619 263 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 DUSP15Q9H1R2 295 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-201ENST00000331920 HLA-DQB1P01920 261 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 UCP3P55916 312 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 AMELYQ99218 206 aa13.8□□□□□ -0.2
PTCH1-201ENST00000331920 ORMDL2Q53FV1 153 aa13.79□□□□□ -0.2
PTCH1-201ENST00000331920 PRDM13Q9H4Q3 707 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms