RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 APOHP02749 345 aaPredicted RBP11.73□□□□□ -0.53
EPHB3-201ENST00000330394 LTBRP36941 435 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 MBNL2Q5VZF2 373 aaKnown RBP11.73□□□□□ -0.53
EPHB3-201ENST00000330394 AMMECR1LQ6DCA0 310 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 MEGF9Q9H1U4 602 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 C7orf71A4D174 169 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 FOXH1O75593 365 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 ZNF497Q6ZNH5 498 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 YLPM1P49750 1951 aaKnown RBP11.72□□□□□ -0.53
EPHB3-201ENST00000330394 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 IGKV1D-33P01593 117 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 IGKV1-33P01594 117 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 TIMD4Q96H15 378 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 KLK15Q9H2R5 256 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 TMEM189A5PLL7 270 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 SAPCD1Q5SSQ6 148 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 DNASE2BQ8WZ79 361 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 CDC42EP3Q9UKI2 254 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 TRAV5A0A0B4J249 113 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 RBPJQ06330 500 aa11.72□□□□□ -0.53
EPHB3-201ENST00000330394 MRPL14Q6P1L8 145 aaKnown RBP11.72□□□□□ -0.53
EPHB3-201ENST00000330394 LINC00614P0C842 121 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 PRRX1P54821 245 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 ZNF146Q15072 292 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 DNLZQ5SXM8 178 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 FAM53AQ6NSI3 398 aaPredicted RBP11.71□□□□□ -0.53
EPHB3-201ENST00000330394 PET117Q6UWS5 81 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 SLC25A33Q9BSK2 321 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 SFXN3Q9BWM7 321 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 S4R3C0 116 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 M0QZ24 198 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 SFTPCP11686 197 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 FCGR2BP31994 310 aaPredicted RBP11.71□□□□□ -0.53
EPHB3-201ENST00000330394 KIR2DL2P43627 348 aaPredicted RBP11.71□□□□□ -0.53
EPHB3-201ENST00000330394 CLDN18P56856 261 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 FOXF2Q12947 444 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 IFI27L2Q9H2X8 130 aa11.71□□□□□ -0.53
EPHB3-201ENST00000330394 IGLV3-32A0A0A0MS00 114 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 A1L4Q6 167 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 SMIM17P0DL12 118 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 PSMB2P49721 201 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF502Q8TBZ5 544 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 GNB1LQ9BYB4 327 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 LINC00470Q9BZP3 86 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.54
EPHB3-201ENST00000330394 TRAV3A0A0B4J244 114 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 GPX1P07203 203 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 ANOS1P23352 680 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF714Q96N38 554 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 CDX2Q99626 313 aaPredicted RBP11.7□□□□□ -0.54
EPHB3-201ENST00000330394 SPG11Q96JI7 2443 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 TRGV8A0A0C4DH27 118 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF585BQ52M93 769 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 SCNM1Q9BWG6 230 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
EPHB3-201ENST00000330394 OSTCQ9NRP0 149 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 MYOD1P15172 320 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 RNASEH2CQ8TDP1 164 aaKnown RBP11.7□□□□□ -0.54
EPHB3-201ENST00000330394 SMIM12Q96EX1 92 aa11.7□□□□□ -0.54
EPHB3-201ENST00000330394 TRAV9-1A0A075B6T8 112 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 PINLYPA6NC86 204 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 C2orf83Q53S99 150 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 FAM216BQ8N7L0 139 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 PRB3Q04118 309 aaPredicted RBP11.69□□□□□ -0.54
EPHB3-201ENST00000330394 TMEM144Q7Z5S9 345 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF114Q8NC26 417 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 IDI2-AS1Q9NZ38 188 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 RNF115Q9Y4L5 304 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 GPR183P32249 361 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 DUTP33316 252 aaKnown RBP11.69□□□□□ -0.54
EPHB3-201ENST00000330394 NTF4P34130 210 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 LHX2P50458 406 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 PRSS8Q16651 343 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 RSPO1Q2MKA7 263 aaPredicted RBP11.69□□□□□ -0.54
EPHB3-201ENST00000330394 PMS2CLQ68D20 193 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 Q6ZVH6 145 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 UBALD2Q8IYN6 164 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 LOXL4Q96JB6 756 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 LINC00479Q96M42 142 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 FBXL7Q9UJT9 491 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 ZGRF1Q86YA3 2104 aa11.69□□□□□ -0.54
EPHB3-201ENST00000330394 SPANXN1Q5VSR9 72 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 Q6ZWC4 215 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 ZNF414Q96IQ9 312 aa11.68□□□□□ -0.54
EPHB3-201ENST00000330394 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms