RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR8G2PQ6IF36 304 aa13.05□□□□□ -0.32
PDLIM1-201ENST00000329399 HAPLN4Q86UW8 402 aa13.05□□□□□ -0.32
PDLIM1-201ENST00000329399 HSD17B11Q8NBQ5 300 aa13.05□□□□□ -0.32
PDLIM1-201ENST00000329399 OR2G3Q8NGZ4 309 aa13.05□□□□□ -0.32
PDLIM1-201ENST00000329399 WDR61Q9GZS3 305 aaKnown RBP13.05□□□□□ -0.32
PDLIM1-201ENST00000329399 ZNF430Q9H8G1 570 aaPredicted RBP13.05□□□□□ -0.32
PDLIM1-201ENST00000329399 RAB19A4D1S5 217 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 C17orf112F2Z3M2 114 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 RRHO14718 337 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 NDUFA3O95167 84 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 MBP02144 154 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 ARL16Q0P5N6 197 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 FOXL1Q12952 345 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 FAM74A1Q5RGS3 127 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 IL34Q6ZMJ4 242 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 Q6ZSV7 163 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 COMMD7Q86VX2 200 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 KCNIP2Q9NS61 270 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 NBR2O15453 112 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 IFNA4P05014 189 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 CD24P25063 80 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 UQCC3Q6UW78 93 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 C3orf56Q8N813 242 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 CACNG8Q8WXS5 425 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 RBMXL1Q96E39 390 aaKnown RBP13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 METTL1Q9UBP6 276 aaKnown RBP13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 FBXO7Q9Y3I1 522 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 WNK1Q9H4A3 2382 aa13.04□□□□□ -0.32
PDLIM1-201ENST00000329399 IGHV3-72A0A0B4J1Y9 119 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 GPX4P36969 197 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 RPL27AP46776 148 aaKnown RBP13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 RAB31Q13636 194 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 AKR1C8PQ5T2L2 129 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 TMEM219Q86XT9 240 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 ZNF709Q8N972 641 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 LINC01006Q8NI28 216 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 LYPD6BQ8NI32 183 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 MARC2Q969Z3 335 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 EAF1Q96JC9 268 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 HINT2Q9BX68 163 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 NPVFQ9HCQ7 196 aa13.03□□□□□ -0.32
PDLIM1-201ENST00000329399 BTBD17A6NE02 478 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 PRSS46E5RG02 174 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 CORTO00230 105 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 NDUFA7O95182 113 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 CA2P00918 260 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 IGKV1D-33P01593 117 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 IGKV1-33P01594 117 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 CRYBA1P05813 215 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 RAB2AP61019 212 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 AANATQ16613 207 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 SPINK9Q5DT21 86 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 ZNF114Q8NC26 417 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 LFNGQ8NES3 379 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 OR1L6Q8NGR2 347 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 OR5R1Q8NH85 324 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 WDR83OSQ9Y284 106 aa13.02□□□□□ -0.33
PDLIM1-201ENST00000329399 PRH1P02810 166 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 CAMLGP49069 296 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 PLGLAQ15195 96 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 MMDQ15546 238 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 HIST2H2BDQ6DRA6 164 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 Q6ZS46 218 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 Q8N6K4 173 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 ZNF747Q9BV97 191 aa13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 TET2Q6N021 2002 aaPredicted RBP13.01□□□□□ -0.33
PDLIM1-201ENST00000329399 A6NDX4 124 aa13□□□□□ -0.33
PDLIM1-201ENST00000329399 MFSD2BA6NFX1 497 aa13□□□□□ -0.33
PDLIM1-201ENST00000329399 RNASE2P10153 161 aaKnown RBP13□□□□□ -0.33
PDLIM1-201ENST00000329399 PXDC1Q5TGL8 231 aa13□□□□□ -0.33
PDLIM1-201ENST00000329399 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
PDLIM1-201ENST00000329399 RITA1Q96K30 269 aa13□□□□□ -0.33
PDLIM1-201ENST00000329399 CXorf58Q96LI9 332 aa13□□□□□ -0.33
PDLIM1-201ENST00000329399 UBE2L5PA0A1B0GUS4 154 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 HBE1P02100 147 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 HES1Q14469 280 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 TNXAQ16473 311 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 C5orf64Q2M2E5 130 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 MRGPRG-AS1Q2M3A8 158 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 PVRIGQ6DKI7 326 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 BTNL8Q6UX41 500 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 Q6ZRG5 221 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
PDLIM1-201ENST00000329399 CLPSL1A2RUU4 121 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 CYB5BO43169 146 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 TMEM11P17152 192 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 FGF7P21781 194 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 PJVKQ0ZLH3 352 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 TEPPQ6URK8 271 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 ZNF562Q6V9R5 426 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 TMEM182Q6ZP80 229 aaPredicted RBP12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 OR4F5Q8NH21 305 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
PDLIM1-201ENST00000329399 TRAV1-1A0A0B4J248 108 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 KRBOX1C9JBD0 128 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 HAX1O00165 279 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms