RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 RLN2P04090 185 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ARL14EPLP0DKL9 152 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 IL3RAP26951 378 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CNBPP62633 177 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PAFAH1B2P68402 229 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 HBG1P69891 147 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 HBG2P69892 147 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 RELAQ04206 551 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CLEC12BQ2HXU8 276 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 COQ5Q5HYK3 327 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 DNM1P34Q6PK57 102 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 AMTNQ6UX39 209 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 Q6ZS52 159 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ANGPTL5Q86XS5 388 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC25A45Q8N413 288 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF321PQ8N8H1 164 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 LY6G5BQ8NDX9 201 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR8J3Q8NGG0 315 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR8J2Q8NGG1 315 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 LHFPL5Q8TAF8 219 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC25A40Q8TBP6 338 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 GNPDA2Q8TDQ7 276 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 DNAJB3Q8WWF6 145 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 REEP6Q96HR9 211 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PGLYRP3Q96LB9 341 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TIPINQ9BVW5 301 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 LINC00574Q9H8X3 128 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC2A9Q9NRM0 540 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TXNL4BQ9NX01 149 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 BTRCQ9Y297 605 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 R4GN34 69 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ABCA1O95477 2261 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A1B0GW64 132 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A1B0GXF2 115 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 PQLC2LA1A4F0 135 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM92AA1XBS5 289 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 ARRDC5A6NEK1 342 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SMIM23A6NLE4 172 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 UBFD1O14562 309 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 CETN3O15182 167 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 GYG2O15488 501 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SH2D1AO60880 128 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 DHFRP00374 187 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 PPBPP02775 128 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 OR5G3P0C626 314 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 IGHV3-30-3P0DP02 117 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 IMPA1P29218 277 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 UBE2MP61081 183 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 RHOAP61586 193 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 B2MP61769 119 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 LCN6P62502 163 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TNNC1P63316 161 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM69Q5SWH9 247 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 LDLRAD2Q5SZI1 272 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM144Q7Z5S9 345 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 ARPINQ7Z6K5 226 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SNX29P2Q8IUI4 249 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SELENOHQ8IZQ5 122 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 JOSD2Q8TAC2 188 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM45AQ8TCE6 357 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 RNF133Q8WVZ7 376 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM106AQ96A25 262 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 GALMQ96C23 342 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 MALSU1Q96EH3 234 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC25A44Q96H78 314 aaPredicted RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF75AQ96N20 296 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 UPK3BQ9BT76 320 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SUCNR1Q9BXA5 334 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 NXF2Q9GZY0 626 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC22A4Q9H015 551 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 GABARAPL1Q9H0R8 117 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 NMNAT1Q9HAN9 279 aaPredicted RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 FBXO8Q9NRD0 319 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TAS2R9Q9NYW1 312 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM216Q9P0N5 145 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF492Q9P255 531 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 KPTNQ9Y664 436 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A0A6YYH2 397 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 ERICH2A1L162 156 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 A6NJ64 397 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 G3V3Q6 166 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 H3BQ85 93 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 CDC42EP2O14613 210 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 MYO1DO94832 1006 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 HMGN1P05114 100 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 CRYGDP07320 174 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 CTSGP08311 255 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 UCHL1P09936 223 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SEC11BP0C7V7 166 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 PSKH1P11801 424 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 PVALBP20472 110 aaPredicted RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 G6PCP35575 357 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 POLR2IP36954 125 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 EMP1P54849 157 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 RAB38P57729 211 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 PSG9Q00887 426 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 GNA12Q03113 381 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 ACTBL2Q562R1 376 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM236Q5W0B7 351 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms