RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TEX46H3BTG2 121 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 BMPR1BO00238 502 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 SSSCA1O60232 199 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 CLN5O75503 358 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 CCNKO75909 580 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 OPRK1P41145 380 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 FCN2Q15485 313 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 GPHB5Q86YW7 130 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 THAP8Q8NA92 274 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 TMEM116Q8NCL8 245 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 STXBP6Q8NFX7 210 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 P2RX4Q99571 388 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 SEPSECSQ9HD40 501 aaKnown RBP4.05□□□□□ -1.76
LRIT3-201ENST00000327908 SIGLEC8Q9NYZ4 499 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 KANTRA0A1W2PQU2 76 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 C1QBP02746 253 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 PF4P02776 101 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 CNTFRP26992 372 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 CAV2P51636 162 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 DLX1P56177 255 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 SLC38A11Q08AI6 406 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 ZNF616Q08AN1 781 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 Q56UQ5 140 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 FAM53AQ6NSI3 398 aaPredicted RBP4.05□□□□□ -1.76
LRIT3-201ENST00000327908 C5orf24Q7Z6I8 188 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 OR52B4Q8NGK2 314 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 LRRC20Q8TCA0 184 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 HSPB9Q9BQS6 159 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 TNFRSF19Q9NS68 423 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 ADAP1O75689 374 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 JTBO76095 146 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 RAB2AP61019 212 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 AKR1C1Q04828 323 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 C1orf194Q5T5A4 169 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 LAMTOR1Q6IAA8 161 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 DPPA3Q6W0C5 159 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 Q71RC1 249 aaPredicted RBP4.05□□□□□ -1.76
LRIT3-201ENST00000327908 ZNF502Q8TBZ5 544 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 PPP1R1CQ8WVI7 109 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 MISP3Q96FF7 219 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 RCC1LQ96I51 464 aaKnown RBP4.05□□□□□ -1.76
LRIT3-201ENST00000327908 ATP5SQ99766 215 aa4.05□□□□□ -1.76
LRIT3-201ENST00000327908 GCN1Q92616 2671 aaKnown RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 ELOA3CA0A087WX78 387 aaPredicted RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 HELTA6NFD8 242 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 TGOLN2O43493 480 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 TOMM40O96008 361 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 SPNP16150 400 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 RPL12P30050 165 aaKnown RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 PPT1P50897 306 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 RAB5CP51148 216 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 BLCAPP62952 87 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 VWC2Q2TAL6 325 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 SPANXN5Q5MJ07 72 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 UTF1Q5T230 341 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 TEPPQ6URK8 271 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 STPG3Q8N7X2 389 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 UBAC2Q8NBM4 344 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 OR2T35Q8NGX2 323 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 CITED1Q99966 193 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 PSMG3Q9BT73 122 aaPredicted RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 MRPL32Q9BYC8 188 aaKnown RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 MFSD2BA6NFX1 497 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 EGR2P11161 476 aaPredicted RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 ARL3P36405 182 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 TAGLN2P37802 199 aaKnown RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 PRB3Q04118 309 aaPredicted RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 RAB32Q13637 225 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 RPEL1Q2QD12 228 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 KHDC1LQ5JSQ8 128 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 C9orf66Q5T8R8 295 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 TMEM252Q8N6L7 170 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 OR10C1Q96KK4 312 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 ABCA1O95477 2261 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 FLNCQ14315 2725 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 ABCA2Q9BZC7 2435 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 FCN1O00602 326 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 CXCL2P19875 107 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 CD24P25063 80 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 TAS2R45P59539 299 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 SERF2P84101 59 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 MRGPRG-AS1Q2M3A8 158 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 ZFP69Q49AA0 526 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 VKORC1L1Q8N0U8 176 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 OR1N2Q8NGR9 330 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 METTL26Q96S19 204 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 ARPC5LQ9BPX5 153 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 PBDC1Q9BVG4 233 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 TPSG1Q9NRR2 321 aa4.04□□□□□ -1.76
LRIT3-201ENST00000327908 PAIP2BQ9ULR5 123 aaKnown RBP4.04□□□□□ -1.76
LRIT3-201ENST00000327908 C15orf62A8K5M9 175 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 A8MWP6 167 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 UMAD1C9J7I0 102 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 I3L2K1 104 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 PFDN1O60925 122 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 IAPPP10997 89 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 PLP1P60201 277 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 NDPQ00604 133 aa4.03□□□□□ -1.76
LRIT3-201ENST00000327908 EWSR1Q01844 656 aaKnown RBP eCLIP4.03□□□□□ -1.76
LRIT3-201ENST00000327908 WT1-ASQ06250 92 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms