RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
TRAK1-201ENST00000327628 LAIR2Q6ISS4 152 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 LINC00518Q8N0U6 118 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 TMEM86BQ8N661 226 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 USMG5Q96IX5 58 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 TRBV7-9A0A0J9YWB2 115 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 A0A1B0GV72 72 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 SCO2A0A1W2PP80 73 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 CRPP02741 224 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 SLC25A16P16260 332 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 FOXL2P58012 376 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 ID3Q02535 119 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 PLPPR1Q8TBJ4 325 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 PRADC1Q9BSG0 188 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 C1QTNF4Q9BXJ3 329 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 TMEM50AO95807 157 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 CELA3AP09093 270 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 CBLN1P23435 193 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 TRBV7-1A0A0A6YYK4 115 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 DPM2O94777 84 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 CRYGSP22914 178 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 C9orf139Q6ZV77 190 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
TRAK1-201ENST00000327628 C1QCP02747 245 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 PLNP26678 52 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 OR5AN1Q8NGI8 311 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 MS4A6AQ9H2W1 248 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 SCN10AQ9Y5Y9 1956 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 FHITP49789 147 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 PAX8Q06710 450 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 C3orf36Q3SXR2 165 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 C1QL2Q7Z5L3 287 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
TRAK1-201ENST00000327628 FAM223BA6NKX1 122 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 SRRM5B3KS81 715 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 AMBPP02760 352 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 DUTP33316 252 aaKnown RBP11.1□□□□□ -0.63
TRAK1-201ENST00000327628 SPRED2Q7Z698 418 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 FAM223AQ8IWN6 122 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 TRGV9Q99603 122 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 NDUFS8O00217 210 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 MDKP21741 143 aaPredicted RBP11.1□□□□□ -0.63
TRAK1-201ENST00000327628 GATA3P23771 443 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 PSG8Q9UQ74 426 aa11.1□□□□□ -0.63
TRAK1-201ENST00000327628 IGHV1-18A0A0C4DH31 117 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 CTSBP07858 339 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 SLC25A48Q6ZT89 311 aaKnown RBP11.09□□□□□ -0.63
TRAK1-201ENST00000327628 OR2K2Q8NGT1 345 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
TRAK1-201ENST00000327628 RHOGP84095 191 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 HEPN1Q6WQI6 88 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 FLVCR1-AS1Q8TAF5 88 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 CACNA1CQ13936 2221 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 TRAV41A0A0B4J266 112 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 TGFBR3LH3BV60 316 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 RAMP1O60894 148 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 C17orf82Q86X59 251 aaPredicted RBP11.09□□□□□ -0.63
TRAK1-201ENST00000327628 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
TRAK1-201ENST00000327628 TAF1LQ8IZX4 1826 aa11.09□□□□□ -0.63
TRAK1-201ENST00000327628 KIAA0100Q14667 2235 aaKnown RBP11.09□□□□□ -0.63
TRAK1-201ENST00000327628 GREB1LQ9C091 1923 aaPredicted RBP11.08□□□□□ -0.63
TRAK1-201ENST00000327628 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.63
TRAK1-201ENST00000327628 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.08□□□□□ -0.63
TRAK1-201ENST00000327628 PSMB11A5LHX3 300 aa11.08□□□□□ -0.63
TRAK1-201ENST00000327628 LYPD3O95274 346 aa11.08□□□□□ -0.63
TRAK1-201ENST00000327628 ZP1P60852 638 aa11.08□□□□□ -0.63
TRAK1-201ENST00000327628 RPL23P62829 140 aaKnown RBP11.08□□□□□ -0.63
TRAK1-201ENST00000327628 Q6ZS49 121 aa11.08□□□□□ -0.63
TRAK1-201ENST00000327628 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
TRAK1-201ENST00000327628 LILRA1O75019 489 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 LTBRP36941 435 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 SIGLEC15Q6ZMC9 328 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 NR2C2APQ86WQ0 139 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 VWCEQ96DN2 955 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 RNASE1P07998 156 aaKnown RBP11.08□□□□□ -0.64
TRAK1-201ENST00000327628 ERVK11-1P61568 191 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 VGLL1Q99990 258 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 IGKV1D-43A0A0B4J1Z2 117 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 HIGD1CA8MV81 97 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 B4DSR2 109 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 J3QRE1 110 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 CD7P09564 240 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
TRAK1-201ENST00000327628 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
TRAK1-201ENST00000327628 C11orf68Q9H3H3 251 aaKnown RBP11.08□□□□□ -0.64
TRAK1-201ENST00000327628 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
TRAK1-201ENST00000327628 FGF16O43320 207 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 IGHV1-46P01743 117 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 TMEM105Q8N8V8 129 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms