RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PINX1Q96BK5 328 aaKnown RBP8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 SMIM3Q9BZL3 60 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 ZNF702PQ9H963 129 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 TRAV41A0A0B4J266 112 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 TRIM77I1YAP6 450 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 AP4M1O00189 453 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 MFAP2P55001 183 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 LILRB2Q8N423 598 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 ATP5SQ99766 215 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 WNT10AQ9GZT5 417 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 DMRT1Q9Y5R6 373 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 CORTO00230 105 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 RPL15P61313 204 aaKnown RBP8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 UBA52P62987 128 aaKnown RBP8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 DLK1P80370 383 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 CLINT1Q14677 625 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 ATP6V1FQ16864 119 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 Q8N2B8 174 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 GGACTQ9BVM4 153 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 WFDC1Q9HC57 220 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 CYTL1Q9NRR1 136 aa8.05□□□□□ -1.12
VIPAS39-201ENST00000327028 G3V318 75 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 CYB5BO43169 146 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 DFFBO76075 338 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 DEFA4P12838 97 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 KLK9Q2XQG4 91 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 TMEM147Q9BVK8 224 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 KLK9Q9UKQ9 250 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 IGLV11-55A0A075B6I3 123 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 TSPAN9O75954 239 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 EXOSC2Q13868 293 aaKnown RBP8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 VWC2Q2TAL6 325 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 OR5T1Q8NG75 326 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 MISP3Q96FF7 219 aa8.04□□□□□ -1.12
VIPAS39-201ENST00000327028 FAM181BA6NEQ2 426 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 FNDC10F2Z333 226 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 GPX4P36969 197 aaPredicted RBP8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 CD69Q07108 199 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 ZNF266Q14584 549 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 TMEM95Q3KNT9 176 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 ARSJQ5FYB0 599 aaPredicted RBP8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 RPL7L1Q6DKI1 246 aaKnown RBP8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 SLC25A24Q6NUK1 477 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 SLC51BQ86UW2 128 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 NOL4LQ96MY1 436 aaPredicted RBP8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 ZNF471Q9BX82 626 aaPredicted RBP8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 UQCC1Q9NVA1 299 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 BORCS7-ASMTA0A0B4J1R7 106 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 HIST1H1BP16401 226 aaKnown RBP8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 OPRK1P41145 380 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 CFHR3Q02985 330 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 SLC16A13Q7RTY0 426 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 STOML3Q8TAV4 291 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 CACNG8Q8WXS5 425 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 LINC00527Q9UJ94 153 aa8.03□□□□□ -1.12
VIPAS39-201ENST00000327028 RPS10-NUDT3A0A1W2PQS6 291 aa8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 H3BUA1 57 aa8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 JTBO76095 146 aa8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 PRH1P02810 166 aa8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 PPIFP30405 207 aaKnown RBP8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 ETFRF1Q6IPR1 90 aa8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 UBAC2Q8NBM4 344 aa8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 PARD6GQ9BYG4 376 aaPredicted RBP8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 FNDC4Q9H6D8 234 aaPredicted RBP8.02□□□□□ -1.12
VIPAS39-201ENST00000327028 UBE2L5PA0A1B0GUS4 154 aa8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 I3L2K1 104 aa8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 TCF21O43680 179 aa8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 SOX15O60248 233 aa8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 BRI3O95415 125 aa8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 IFNA5P01569 189 aa8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 EIF5AP63241 154 aaKnown RBP8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 GON7Q9BXV9 100 aa8.02□□□□□ -1.13
VIPAS39-201ENST00000327028 K7EIM0 57 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 MT-CO2P00403 227 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 CRYBA1P05813 215 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 TPT1P13693 172 aaKnown RBP8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 Q6ZSV7 163 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 SLC35E1Q96K37 410 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 ARV1Q9H2C2 271 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 THYN1Q9P016 225 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 TRBV9A0A0B4J1U6 114 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 SMCO3A2RU48 225 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 OR2T6Q8NHC8 308 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 ST8SIA2Q92186 375 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 WDR61Q9GZS3 305 aaKnown RBP8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 SERTAD4Q9NUC0 356 aa8.01□□□□□ -1.13
VIPAS39-201ENST00000327028 OR2J3O76001 311 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 IGLV1-40P01703 118 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 MDKP21741 143 aaPredicted RBP8□□□□□ -1.13
VIPAS39-201ENST00000327028 AKR1C1Q04828 323 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 GAMTQ14353 236 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 NECAP1Q8NC96 275 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 GINS3Q9BRX5 216 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 ZNF355PQ9NSJ1 428 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 FBXL7Q9UJT9 491 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 WDR83OSQ9Y284 106 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 TMEM89A2RUT3 159 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms