RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 FAM214BQ7L5A3 538 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 NKX6-3A6NJ46 265 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 TNRC18O15417 2968 aaPredicted RBP11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 HLA-DQA1P01909 254 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 GNG5P63218 68 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 COTL1Q14019 142 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 FBLN7Q53RD9 439 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 OR10J3Q5JRS4 329 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 OR10W1Q8NGF6 305 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 ZNF503Q96F45 646 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 WISP2O76076 250 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 TOX4O94842 621 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 LINC00173Q6ZV60 143 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 SPACA3Q8IXA5 215 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 TACC2O95359 2948 aa11.73□□□□□ -0.53
CHRNA3-201ENST00000326828 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 HOXC12P31275 282 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 CA7P43166 264 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 DUSP3P51452 185 aaPredicted RBP11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 GDF5OSQ5U4N7 250 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 BLNKQ8WV28 456 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 OR51B2Q9Y5P1 312 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 LOC105371242A0A075B767 164 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 TRBV9A0A0B4J1U6 114 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 J3QR06 171 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 LINC00869P0C866 280 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 AREGP15514 252 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 KLF3P57682 345 aaPredicted RBP11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 RNFT1Q5M7Z0 435 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 ZNF841Q6ZN19 808 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 C11orf52Q96A22 123 aa11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 TNRC6BQ9UPQ9 1833 aaKnown RBP11.72□□□□□ -0.53
CHRNA3-201ENST00000326828 NTN3O00634 580 aaPredicted RBP11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 ZNF138P52744 262 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 DUX4L9Q6RFH8 374 aaPredicted RBP11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 TCF24Q7RTU0 167 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 ZNF596Q8TC21 504 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 ABI3Q9P2A4 366 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 CNOT1A5YKK6 2376 aaKnown RBP11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 TRAV9-1A0A075B6T8 112 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 IQCF6A8MYZ5 107 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 TMEM249Q2WGJ8 235 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 SPRNQ5BIV9 151 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 LDLRAD2Q5SZI1 272 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 TRIB1Q96RU8 372 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 CXXC4Q9H2H0 198 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 TMEM167BQ9NRX6 74 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 ATMQ13315 3056 aa11.71□□□□□ -0.53
CHRNA3-201ENST00000326828 NUDT3O95989 172 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 CSN3P07498 182 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 SP1P08047 785 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 ADH4P08319 380 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 UBE2G1P62253 170 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 OR5B3Q8NH48 314 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 NEUROG1Q92886 237 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 OSTCQ9NRP0 149 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 SPRR3Q9UBC9 169 aa11.71□□□□□ -0.54
CHRNA3-201ENST00000326828 INTS1Q8N201 2190 aaKnown RBP11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 PCSK5Q92824 1860 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 SAA2-SAA4A0A096LPE2 208 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 IGLV2-8P01709 118 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 SAA2P0DJI9 122 aaPredicted RBP11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 APELAP0DMC3 54 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 HSPE1P61604 102 aaKnown RBP11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 PMS2CLQ68D20 193 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 IFI27L2Q9H2X8 130 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 TRAV9-2A0A087WT02 112 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 HIGD1CA8MV81 97 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 TNFSF4P23510 183 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 NUP35Q8NFH5 326 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 HES4Q9HCC6 221 aa11.7□□□□□ -0.54
CHRNA3-201ENST00000326828 SELENOVP59797 346 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 PRR20EP86478 221 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 PRR20CP86479 221 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 PRR20DP86480 221 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 PRR20BP86481 221 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 PRR20AP86496 221 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 TNFRSF19Q9NS68 423 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 AMMECR1Q9Y4X0 333 aaPredicted RBP11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 IGKV1D-17A0A075B6S4 117 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 TRGV5A0A0B4J1U4 118 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 OR4C46A6NHA9 309 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 ISLRO14498 428 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 REG1BP48304 166 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 C19orf35Q6ZS72 473 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 ADGRG4Q8IZF6 3080 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 IGHV2OR16-5A0A0B4J2B6 119 aa11.69□□□□□ -0.54
CHRNA3-201ENST00000326828 SPRY3O43610 288 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms