RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 PITX3O75364 302 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 KBTBD11O94819 623 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 SFTA3P0C7M3 94 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 IAPPP10997 89 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 RAB5AP20339 215 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 P2RY1P47900 373 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 RAB5CP51148 216 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 RELBQ01201 579 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 POU2AF1Q16633 256 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 FAM120AOSQ5T036 256 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 BTNL8Q6UX41 500 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 BET1LQ9NYM9 111 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 ACANP16112 2415 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 CELSR1Q9NYQ6 3014 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 UPK2O00526 184 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 CHST1O43916 411 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 ACTL6BO94805 426 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 CDX1P47902 265 aaPredicted RBP8.04□□□□□ -1.12
HMGB3-201ENST00000325307 UBE2KP61086 200 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 ID3Q02535 119 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 UBAC2Q8NBM4 344 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 FBXL15Q9H469 300 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 YAE1D1Q9NRH1 226 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 PRNDQ9UKY0 176 aa8.04□□□□□ -1.12
HMGB3-201ENST00000325307 TEX15Q9BXT5 2789 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 FAM90A9PA6NNJ1 464 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 EREGO14944 169 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 SYNGR2O43760 224 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 GPR137BO60478 399 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 FBXO24O75426 580 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 IGLV2-23P01705 113 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 GNB1P62873 340 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 RPL8P62917 257 aaKnown RBP8.03□□□□□ -1.12
HMGB3-201ENST00000325307 PSG5Q15238 335 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 COMMD5Q9GZQ3 224 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 SH3BGRL3Q9H299 93 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 TPSG1Q9NRR2 321 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 OR51B2Q9Y5P1 312 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 BAHCC1Q9P281 2608 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 C15orf61A6NNL5 157 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 PAX9P55771 341 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 SMIM15Q7Z3B0 74 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 RBKSQ9H477 322 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 RFNGQ9Y644 331 aa8.03□□□□□ -1.12
HMGB3-201ENST00000325307 C9JQL5 133 aa8.02□□□□□ -1.12
HMGB3-201ENST00000325307 MYOD1P15172 320 aa8.02□□□□□ -1.12
HMGB3-201ENST00000325307 SULT1A2P50226 295 aa8.02□□□□□ -1.12
HMGB3-201ENST00000325307 EWSR1Q01844 656 aaKnown RBP eCLIP8.02□□□□□ -1.12
HMGB3-201ENST00000325307 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.12
HMGB3-201ENST00000325307 IL17RELQ6ZVW7 336 aa8.02□□□□□ -1.12
HMGB3-201ENST00000325307 RNF5Q99942 180 aa8.02□□□□□ -1.12
HMGB3-201ENST00000325307 ENY2Q9NPA8 101 aa8.02□□□□□ -1.12
HMGB3-201ENST00000325307 FAM24AA6NFZ4 105 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 FAM90A26D6RGX4 464 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 H3BP45 60 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 NBR2O15453 112 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 TEX45Q8NA69 505 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 ZDHHC16Q969W1 377 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 ZNF430Q9H8G1 570 aaPredicted RBP8.02□□□□□ -1.13
HMGB3-201ENST00000325307 FKBP11Q9NYL4 201 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 HSPB7Q9UBY9 170 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 FOXA2Q9Y261 457 aaPredicted RBP8.02□□□□□ -1.13
HMGB3-201ENST00000325307 MDFIC2A0A1B0GVS7 189 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 ZNF705EA8MWA4 302 aaPredicted RBP8.02□□□□□ -1.13
HMGB3-201ENST00000325307 RRHO14718 337 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 SNRPCP09234 159 aaKnown RBP8.02□□□□□ -1.13
HMGB3-201ENST00000325307 SRP14P37108 136 aaKnown RBP8.02□□□□□ -1.13
HMGB3-201ENST00000325307 TNXAQ16473 311 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 FBLN7Q53RD9 439 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 BCL6BQ8N143 479 aaPredicted RBP8.02□□□□□ -1.13
HMGB3-201ENST00000325307 OR4A5Q8NH83 315 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 TMEM167AQ8TBQ9 72 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 RAB40CQ96S21 281 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 GINS3Q9BRX5 216 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 LYRM2Q9NU23 88 aaPredicted RBP8.02□□□□□ -1.13
HMGB3-201ENST00000325307 TMEM14BQ9NUH8 114 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 TCF19Q9Y242 345 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 SIGLEC9Q9Y336 463 aa8.02□□□□□ -1.13
HMGB3-201ENST00000325307 JTBO76095 146 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 HSPE1P61604 102 aaKnown RBP8.01□□□□□ -1.13
HMGB3-201ENST00000325307 RPL23AP62750 156 aaKnown RBP8.01□□□□□ -1.13
HMGB3-201ENST00000325307 LRRC75BQ2VPJ9 315 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 PPP1R27Q86WC6 154 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 OR2C3Q8N628 320 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 HEYLQ9NQ87 328 aaPredicted RBP8.01□□□□□ -1.13
HMGB3-201ENST00000325307 SONP18583 2426 aaKnown RBP8.01□□□□□ -1.13
HMGB3-201ENST00000325307 TNCP24821 2201 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 CD5LO43866 347 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 LY6EQ16553 131 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 ZNF429Q86V71 674 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 TMEM219Q86XT9 240 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 MMD2Q8IY49 270 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 PACRGQ96M98 296 aaPredicted RBP8.01□□□□□ -1.13
HMGB3-201ENST00000325307 NDUFAF3Q9BU61 184 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 CLEC5AQ9NY25 188 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 PSENENQ9NZ42 101 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 H3BUX3 64 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 CNIH1O95406 144 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 PRSS8Q16651 343 aa8.01□□□□□ -1.13
HMGB3-201ENST00000325307 DEFB112Q30KQ8 113 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms