RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 GABARAPO95166 117 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 APOHP02749 345 aaPredicted RBP9.1□□□□□ -0.95
TPM3-204ENST00000323144 CD3DP04234 171 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 S100GP29377 79 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 BMI1P35226 326 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 AKR1C2P52895 323 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 UCP3P55916 312 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 RND3P61587 244 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
TPM3-204ENST00000323144 RNASE10Q5GAN6 216 aaKnown RBP9.1□□□□□ -0.95
TPM3-204ENST00000323144 LAMTOR1Q6IAA8 161 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 FAAP20Q6NZ36 180 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 GBGT1Q8N5D6 347 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 SLC35G3Q8N808 338 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 TMEM116Q8NCL8 245 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 ST8SIA2Q92186 375 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 RNF183Q96D59 192 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 FKBP11Q9NYL4 201 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 MRPL36Q9P0J6 103 aaKnown RBP9.1□□□□□ -0.95
TPM3-204ENST00000323144 EXTL2Q9UBQ6 330 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 KIR2DL5BA0A0G2JN68 375 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 KIR2DL5BA0A0G2JPC4 375 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 NUPR2A6NF83 97 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 GNG7O60262 68 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 LY6G6CO95867 125 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 MFAP4P55083 255 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 PIGPP57054 158 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 CTF1Q16619 201 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 FAM90A2PQ658T7 463 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 LPCAT3Q6P1A2 487 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 KIR2DL5AQ8N109 375 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 STPG3Q8N7X2 389 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 KIR2DL5BQ8NHK3 375 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 GALNT14Q96FL9 552 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 CMTM3Q96MX0 182 aa9.09□□□□□ -0.95
TPM3-204ENST00000323144 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
TPM3-204ENST00000323144 SMIM31A0A1B0GVY4 71 aa9.08□□□□□ -0.96
TPM3-204ENST00000323144 RNASE2P10153 161 aaKnown RBP9.08□□□□□ -0.96
TPM3-204ENST00000323144 HOXA1P49639 335 aaPredicted RBP9.08□□□□□ -0.96
TPM3-204ENST00000323144 HSPE1P61604 102 aaKnown RBP9.08□□□□□ -0.96
TPM3-204ENST00000323144 SP6Q3SY56 376 aa9.08□□□□□ -0.96
TPM3-204ENST00000323144 TOMM20LQ6UXN7 152 aa9.08□□□□□ -0.96
TPM3-204ENST00000323144 TCF24Q7RTU0 167 aa9.08□□□□□ -0.96
TPM3-204ENST00000323144 OR13C8Q8NGS7 320 aa9.08□□□□□ -0.96
TPM3-204ENST00000323144 MIXL1Q9H2W2 232 aa9.08□□□□□ -0.96
TPM3-204ENST00000323144 A0A0B4J293 547 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 A0A1B0GU03 582 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 UBE2CO00762 179 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 TRIM16LQ309B1 348 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 LEMD1Q68G75 181 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 ARRDC1Q8N5I2 433 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 LHFPL5Q8TAF8 219 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 ZNF486Q96H40 463 aaPredicted RBP9.07□□□□□ -0.96
TPM3-204ENST00000323144 ABHD1Q96SE0 405 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 TXN2Q99757 166 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 FNDC4Q9H6D8 234 aaPredicted RBP9.07□□□□□ -0.96
TPM3-204ENST00000323144 MTFP1Q9UDX5 166 aa9.07□□□□□ -0.96
TPM3-204ENST00000323144 PUS1Q9Y606 427 aaKnown RBP eCLIP9.07□□□□□ -0.96
TPM3-204ENST00000323144 C3orf85A0A1B0GTC6 90 aa9.06□□□□□ -0.96
TPM3-204ENST00000323144 RORCP51449 518 aa9.06□□□□□ -0.96
TPM3-204ENST00000323144 SCGB2B2Q4G0G5 96 aa9.06□□□□□ -0.96
TPM3-204ENST00000323144 GPR107Q5VW38 600 aa9.06□□□□□ -0.96
TPM3-204ENST00000323144 CEMP1Q6PRD7 247 aaPredicted RBP9.06□□□□□ -0.96
TPM3-204ENST00000323144 MARCH1Q8TCQ1 289 aa9.06□□□□□ -0.96
TPM3-204ENST00000323144 GINS3Q9BRX5 216 aa9.06□□□□□ -0.96
TPM3-204ENST00000323144 VSIRQ9H7M9 311 aa9.06□□□□□ -0.96
TPM3-204ENST00000323144 TRAV14DV4A0A0A6YYC5 116 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 DFFBO76075 338 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 CA1P00915 261 aaPredicted RBP9.05□□□□□ -0.96
TPM3-204ENST00000323144 IFNA17P01571 189 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 CD74P04233 296 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 TBPP20226 339 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 UCP1P25874 307 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 ETV6P41212 452 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 ERHP84090 104 aaKnown RBP9.05□□□□□ -0.96
TPM3-204ENST00000323144 PVRIGQ6DKI7 326 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 MZT2AQ6P582 158 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 ZNF600Q6ZNG1 722 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 RPP25LQ8N5L8 163 aaKnown RBP9.05□□□□□ -0.96
TPM3-204ENST00000323144 RNASE11Q8TAA1 199 aaKnown RBP9.05□□□□□ -0.96
TPM3-204ENST00000323144 AP3S1Q92572 193 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 MS4A6AQ9H2W1 248 aa9.05□□□□□ -0.96
TPM3-204ENST00000323144 MPTX1A8MV57 137 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 INS-IGF2F8WCM5 200 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 DEFB4AO15263 64 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 DEDDO75618 318 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 NXPH3O95157 252 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 RAB3DO95716 219 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 OR5AC1P0C628 307 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 ZNF182P17025 639 aaPredicted RBP9.04□□□□□ -0.96
TPM3-204ENST00000323144 C4BPBP20851 252 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 OPRK1P41145 380 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 DEFB131AP59861 70 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 NANOS2P60321 138 aaKnown RBP9.04□□□□□ -0.96
TPM3-204ENST00000323144 SPCS2Q15005 226 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 BSXQ3C1V8 233 aa9.04□□□□□ -0.96
TPM3-204ENST00000323144 Q6ZRM9 215 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms