RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNF562Q6V9R5 426 aa14.21□□□□□ -0.13
RAB39A-201ENST00000320578 KMT2BQ9UMN6 2715 aaPredicted RBP14.21□□□□□ -0.14
RAB39A-201ENST00000320578 LRRK2Q5S007 2527 aa14.21□□□□□ -0.14
RAB39A-201ENST00000320578 IFNA1P01562 189 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 CDC34P49427 236 aaPredicted RBP14.2□□□□□ -0.14
RAB39A-201ENST00000320578 B2MP61769 119 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 GNB1P62873 340 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 HNF4GQ14541 408 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 MIC13Q5XKP0 118 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 RAB24Q969Q5 203 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 C19orf24Q9BVV8 132 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 FAM208BQ5VWN6 2430 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 A0A096LNT2 108 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 LOC102723971A0A1B0GUV8 181 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 A0A1B0GV50 99 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 CNIH1O95406 144 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 AREGP15514 252 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 TMEM11P17152 192 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 FAM122CQ6P4D5 195 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 RBMS3Q6XE24 437 aaKnown RBP14.2□□□□□ -0.14
RAB39A-201ENST00000320578 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 STPG3Q8N7X2 389 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 THAP8Q8NA92 274 aa14.2□□□□□ -0.14
RAB39A-201ENST00000320578 FNDC4Q9H6D8 234 aaPredicted RBP14.2□□□□□ -0.14
RAB39A-201ENST00000320578 LINC00869P0C866 280 aa14.19□□□□□ -0.14
RAB39A-201ENST00000320578 BCL2P10415 239 aa14.19□□□□□ -0.14
RAB39A-201ENST00000320578 PPT1P50897 306 aa14.19□□□□□ -0.14
RAB39A-201ENST00000320578 ICAM4Q14773 271 aa14.19□□□□□ -0.14
RAB39A-201ENST00000320578 FXYD3Q14802 87 aa14.19□□□□□ -0.14
RAB39A-201ENST00000320578 RARRES2Q99969 163 aa14.19□□□□□ -0.14
RAB39A-201ENST00000320578 IGKV1OR2-108A0A075B7D4 117 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 DEFA5Q01523 94 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 MEGF9Q9H1U4 602 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 SLC25A22Q9H936 323 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 A0A1W2PPV4 95 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 CTRB1P17538 263 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 CD24P25063 80 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 MFAP2P55001 183 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 LOXL1Q08397 574 aaPredicted RBP14.18□□□□□ -0.14
RAB39A-201ENST00000320578 MLANAQ16655 118 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 DEFB113Q30KQ7 82 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 CTRB2Q6GPI1 263 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 TMEM116Q8NCL8 245 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 SSMEM1Q8WWF3 244 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 MBD6Q96DN6 1003 aa14.18□□□□□ -0.14
RAB39A-201ENST00000320578 SNAPINO95295 136 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 REG1AP05451 166 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 SRP19P09132 144 aaKnown RBP14.17□□□□□ -0.14
RAB39A-201ENST00000320578 PAX6P26367 422 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 OR10J1P30954 320 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 PSMB3P49720 205 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 FGF8P55075 233 aaPredicted RBP14.17□□□□□ -0.14
RAB39A-201ENST00000320578 SELENOTP62341 195 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 HAGHQ16775 308 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 LINC01356Q8N9X3 169 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 OR2T6Q8NHC8 308 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 MANBALQ9NQG1 85 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 GNG13Q9P2W3 67 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 VAX2Q9UIW0 290 aa14.17□□□□□ -0.14
RAB39A-201ENST00000320578 NPIPB5A8MRT5 1133 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 HLA-DRB1P01911 266 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 RHOBP62745 196 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 CX3CL1P78423 397 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 FBLN7Q53RD9 439 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 SLC35E3Q7Z769 313 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 Q8N9W7 124 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 C22orf15Q8WYQ4 148 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 MED13LQ71F56 2210 aa14.16□□□□□ -0.14
RAB39A-201ENST00000320578 NCBP2LA6PVI3 153 aaKnown RBP14.15□□□□□ -0.14
RAB39A-201ENST00000320578 J3QLI3 93 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 STAG3L2P0CL84 134 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 STAG3L3P0CL85 134 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 COL8A1P27658 744 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 KRTAP10-9P60411 292 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 GUCA2BQ16661 112 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 GCSAMLQ5JQS6 135 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 PRSS57Q6UWY2 283 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 CYP2G1PQ6ZSU1 146 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 ARPC1AQ92747 370 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 NKX6-2Q9C056 277 aaPredicted RBP14.15□□□□□ -0.14
RAB39A-201ENST00000320578 C7orf69Q9H7B7 122 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 SPG11Q96JI7 2443 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 WNK2Q9Y3S1 2297 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 TCRBV4S1A1TA0A5B7 111 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 FAM120AOSQ5T036 256 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 ABHD5Q8WTS1 349 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 NPIPB3Q92617 1050 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 ACY3Q96HD9 319 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 RNF2Q99496 336 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 TRGV9Q99603 122 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 WNT10AQ9GZT5 417 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 HIF1ANQ9NWT6 349 aa14.15□□□□□ -0.14
RAB39A-201ENST00000320578 SCO1O75880 301 aa14.14□□□□□ -0.15
RAB39A-201ENST00000320578 SOHLH1Q5JUK2 328 aa14.14□□□□□ -0.15
RAB39A-201ENST00000320578 TTC9CQ8N5M4 171 aa14.14□□□□□ -0.15
RAB39A-201ENST00000320578 NANPQ8TBE9 248 aa14.14□□□□□ -0.15
RAB39A-201ENST00000320578 RXFP4Q8TDU9 374 aa14.14□□□□□ -0.15
RAB39A-201ENST00000320578 MISP3Q96FF7 219 aa14.14□□□□□ -0.15
RAB39A-201ENST00000320578 PSMG3-AS1Q96PY0 264 aa14.14□□□□□ -0.15
RAB39A-201ENST00000320578 IGKV1D-37A0A075B6S9 117 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms