RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 SDF2L1Q9HCN8 221 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 NPVFQ9HCQ7 196 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 SEPSECSQ9HD40 501 aaKnown RBP12.87□□□□□ -0.35
SHISA2-201ENST00000319420 DOPEY1Q5JWR5 2465 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 CYB5BO43169 146 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 PLGLAQ15195 96 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 TNXAQ16473 311 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 CLEC7AQ9BXN2 247 aa12.87□□□□□ -0.35
SHISA2-201ENST00000319420 PRSS47A8MTI9 375 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 RPS10P46783 165 aaKnown RBP12.86□□□□□ -0.35
SHISA2-201ENST00000319420 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 LDLRAD2Q5SZI1 272 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 DOK5Q9P104 306 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 MBP02144 154 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 LCN2P80188 198 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 CLEC12BQ2HXU8 276 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 BET1LQ9NYM9 111 aa12.86□□□□□ -0.35
SHISA2-201ENST00000319420 IGKV1OR2-108A0A075B7D4 117 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 A0A087WWC5 75 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 IFNA1P01562 189 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 ARL14EPLP0DKL9 152 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 OPRK1P41145 380 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 TMEM30BQ3MIR4 351 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 P2RX4Q99571 388 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 FBXL15Q9H469 300 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
SHISA2-201ENST00000319420 MAS1LP35410 378 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 PSMB3P49720 205 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 PRRX1P54821 245 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
SHISA2-201ENST00000319420 OR1L8Q8NGR8 309 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 SMIM7Q9BQ49 75 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 ABCA12Q86UK0 2595 aa12.85□□□□□ -0.35
SHISA2-201ENST00000319420 FOXH1O75593 365 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 NPPCP23582 126 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 IL3RAP26951 378 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 HES1Q14469 280 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 ADIRFQ15847 76 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 POU2AF1Q16633 256 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 PDPNQ86YL7 162 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
SHISA2-201ENST00000319420 IGHV1-3A0A0C4DH29 117 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 LIPFP07098 398 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 HNF1AP20823 631 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 OR10J1P30954 320 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 GPR6P46095 362 aaPredicted RBP12.84□□□□□ -0.35
SHISA2-201ENST00000319420 ATP5G3P48201 142 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 ERHP84090 104 aaKnown RBP12.84□□□□□ -0.35
SHISA2-201ENST00000319420 TMEM177Q53S58 311 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 PCGF1Q9BSM1 259 aa12.84□□□□□ -0.35
SHISA2-201ENST00000319420 LOC105371242A0A075B767 164 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 IGLV2-23P01705 113 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 RNASE2P10153 161 aaKnown RBP12.83□□□□□ -0.35
SHISA2-201ENST00000319420 AREGP15514 252 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 GAMTQ14353 236 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 FAM78BQ5VT40 261 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 REC114Q7Z4M0 266 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 OR4P4Q8NGL7 312 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 OR5B3Q8NH48 314 aa12.83□□□□□ -0.35
SHISA2-201ENST00000319420 METTL1Q9UBP6 276 aaKnown RBP12.83□□□□□ -0.35
SHISA2-201ENST00000319420 IGLV1-47P01700 117 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 USF1P22415 310 aaPredicted RBP12.83□□□□□ -0.36
SHISA2-201ENST00000319420 C4orf17Q53FE4 359 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 PYY3Q5JQD4 70 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 NECAP1Q8NC96 275 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 PARLQ9H300 379 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 NDUFA4L2Q9NRX3 87 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 CGB1A6NKQ9 187 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 FCN1O00602 326 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 TIMM23O14925 209 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 PMS2P11Q13670 270 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 MALSU1Q96EH3 234 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 FAM103A1Q9BTL3 118 aaKnown RBP12.83□□□□□ -0.36
SHISA2-201ENST00000319420 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
SHISA2-201ENST00000319420 LSM4Q9Y4Z0 139 aaKnown RBP12.83□□□□□ -0.36
SHISA2-201ENST00000319420 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 A0A1W2PPI3 338 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 C11orf94C9JXX5 98 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 ZFP36P26651 326 aaKnown RBP12.82□□□□□ -0.36
SHISA2-201ENST00000319420 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 DERL1Q9BUN8 251 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 ZNF257Q9Y2Q1 563 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 RAB31Q13636 194 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 LINC00311Q8N616 119 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 CHODLQ9H9P2 273 aa12.82□□□□□ -0.36
SHISA2-201ENST00000319420 CSPG4Q6UVK1 2322 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 SEC14L6B5MCN3 397 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 OR10J4P0C629 311 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 MMDQ15546 238 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 FBLN7Q53RD9 439 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 VSTM2AQ8TAG5 236 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 NPIPB3Q92617 1050 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 PRDM13Q9H4Q3 707 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms