RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 FAM216AQ8WUB2 273 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 QTRT1Q9BXR0 403 aaKnown RBP7.78□□□□□ -1.16
CAPN3-201ENST00000318023 SCO2A0A1W2PP80 73 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 H3BUT2 72 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 TMPRSS2O15393 492 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 CD5LO43866 347 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 SLC38A11Q08AI6 406 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 TNXAQ16473 311 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 GCSAMLQ5JQS6 135 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 C12orf54Q6X4T0 127 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 MMD2Q8IY49 270 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 ST8SIA1Q92185 356 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 PERPQ96FX8 193 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 ABHD14BQ96IU4 210 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 POM121L2Q96KW2 1035 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 SFXN3Q9BWM7 321 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 CCL28Q9NRJ3 127 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 PSG11Q9UQ72 335 aa7.77□□□□□ -1.16
CAPN3-201ENST00000318023 A0A096LPE4 126 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 TEX48A0A1B0GUV7 120 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 A0A1W2PPZ6 126 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 OR4C46A6NHA9 309 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 K7EN84 100 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 M0R2Z0 102 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 BMPR1BO00238 502 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 TFF3Q07654 80 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 SLC25A34Q6PIV7 304 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 OR1F12Q8NHA8 337 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 LYZL4Q96KX0 146 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 HEATR1Q9H583 2144 aaKnown RBP7.77□□□□□ -1.17
CAPN3-201ENST00000318023 TRAV38-1A0A0B4J264 116 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 H0Y8G0 127 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 SYNGR2O43760 224 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 HSBP1O75506 76 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 DAP3P51398 398 aaKnown RBP7.77□□□□□ -1.17
CAPN3-201ENST00000318023 UBE2G1P62253 170 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 DOK3Q7L591 496 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 NEGR1Q7Z3B1 354 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 CXorf67Q86X51 503 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-201ENST00000318023 SLC25A40Q8TBP6 338 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 RAB40CQ96S21 281 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 PIGLQ9Y2B2 252 aa7.77□□□□□ -1.17
CAPN3-201ENST00000318023 K7EQM0 130 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 MRPL33O75394 65 aaKnown RBP7.76□□□□□ -1.17
CAPN3-201ENST00000318023 COL8A2P25067 703 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 SUMO3P55854 103 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-201ENST00000318023 RAC3P60763 192 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 NINJ1Q92982 152 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 TSSC4Q9Y5U2 329 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-201ENST00000318023 FLNAP21333 2647 aaKnown RBP7.76□□□□□ -1.17
CAPN3-201ENST00000318023 SVEP1Q4LDE5 3571 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 SAA2-SAA4A0A096LPE2 208 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 SH2D7A6NKC9 451 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-201ENST00000318023 F5H5K5 113 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 TRAPPC2LH3BP13 241 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
CAPN3-201ENST00000318023 FABP6P51161 128 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 RHOBP62745 196 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 FXYD3Q14802 87 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 RPEL1Q2QD12 228 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 ASPHD1Q5U4P2 390 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 CCDC144NLQ6NUI1 221 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 RNASEKQ6P5S7 137 aaKnown RBP7.76□□□□□ -1.17
CAPN3-201ENST00000318023 RAB37Q96AX2 223 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 OR8B2Q96RD0 313 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 ZNF442Q9H7R0 627 aa7.76□□□□□ -1.17
CAPN3-201ENST00000318023 APOA2P02652 100 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 PSG2P11465 335 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 TMEM177Q53S58 311 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 KCNK17Q96T54 332 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 SS18L2Q9UHA2 77 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 PDE6DO43924 150 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 MT-ATP6P00846 226 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 IGHG1P01857 330 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 HSD52Q0P140 79 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 TMEM136Q6ZRR5 245 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 RNASE6Q93091 150 aaKnown RBP7.75□□□□□ -1.17
CAPN3-201ENST00000318023 NPFFR1Q9GZQ6 430 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 HILPDAQ9Y5L2 63 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 MS4A18H0YCH9 400 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 HSPB6O14558 160 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 DEGS1O15121 323 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 SCGB1A1P11684 91 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 MS4A18Q3C1V0 323 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 PRAMEF5Q5TYX0 476 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 PRAMEF6Q5VXH4 476 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 OR1L1Q8NH94 360 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 OR2T6Q8NHC8 308 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 BLNKQ8WV28 456 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 RDH5Q92781 318 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 PMCHL2Q9BQD1 86 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 GNB1LQ9BYB4 327 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 ZANQ9Y493 2812 aa7.75□□□□□ -1.17
CAPN3-201ENST00000318023 HIVEP1P15822 2718 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 C16orf97H3BN30 126 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 J3QR06 171 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 CDIPTO14735 213 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms