RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SRRM4A7MD48 611 aaKnown RBP6.2□□□□□ -1.42
TRIM55-202ENST00000315962 NDUFB3O43676 98 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 ACTL6BO94805 426 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 CD24P25063 80 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 SERF2P84101 59 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 EIF4EBP1Q13541 118 aaPredicted RBP6.2□□□□□ -1.42
TRIM55-202ENST00000315962 MIC13Q5XKP0 118 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 Q6ZVH6 145 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 FAM222BQ8WU58 562 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 CTDSP1Q9GZU7 261 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM242Q9NWH2 141 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 RNF212BA8MTL3 300 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 RRHO14718 337 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 ARL14EPLP0DKL9 152 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 CGB3P0DN86 165 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 CGB7P0DN87 165 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 PRB4P10163 310 aaPredicted RBP6.2□□□□□ -1.42
TRIM55-202ENST00000315962 COX7A1P24310 79 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM95Q3KNT9 176 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 C3orf36Q3SXR2 165 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM14EPQ6UXP3 125 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 GBGT1Q8N5D6 347 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 RITA1Q96K30 269 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 P2RX4Q99571 388 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 ACTR3CQ9C0K3 210 aaPredicted RBP6.2□□□□□ -1.42
TRIM55-202ENST00000315962 JPT1Q9UK76 154 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 hADV38S2A0JD32 116 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 NKX6-3A6NJ46 265 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 YPEL1O60688 119 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 WNT2P09544 360 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 RAB4AP20338 218 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 ZNF672Q499Z4 452 aaPredicted RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 LRRC10Q5BKY1 277 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 OR10X1Q8NGY0 326 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 PINX1Q96BK5 328 aaKnown RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 ZNF714Q96N38 554 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 YPEL2Q96QA6 119 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 HSD17B10Q99714 261 aaKnown RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 PRORYQ9H606 182 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 NAGKQ9UJ70 344 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 FBN2P35556 2912 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 A0A1W2PPV4 95 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 F2RL2O00254 374 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 RAB29O14966 203 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 ENSAO43768 121 aaKnown RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 FOXH1O75593 365 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 FXYD3Q14802 87 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 IQCJQ1A5X6 159 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 TEX36Q5VZQ5 186 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 Q6ZWC4 215 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 OR4A16Q8NH70 328 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 HSPB9Q9BQS6 159 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM147Q9BVK8 224 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 UBTD1Q9HAC8 227 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 HEYLQ9NQ87 328 aaPredicted RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM140Q9NV12 185 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 IDI2-AS1Q9NZ38 188 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 B9A039 149 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 SERF1AO75920 110 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 CT45A6P0DMU7 189 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 CT45A5P0DMU8 189 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 CT45A7P0DMV0 189 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 LOXP28300 417 aaPredicted RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 IER3P46695 156 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 MLANAQ16655 118 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 SAPCD1Q5SSQ6 148 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 ERASQ7Z444 233 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 MOB3BQ86TA1 216 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 NHLRC2Q8NBF2 726 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 CMTM2Q8TAZ6 248 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 LSM10Q969L4 123 aaKnown RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 DIRC2Q96SL1 478 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 PYGO2Q9BRQ0 406 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 MRPL20Q9BYC9 149 aaKnown RBP6.19□□□□□ -1.42
TRIM55-202ENST00000315962 LPAR2Q9HBW0 351 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 TP53TG3Q9ULZ0 132 aa6.19□□□□□ -1.42
TRIM55-202ENST00000315962 DOPEY1Q5JWR5 2465 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 PMS2P5A8MQ11 134 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 F6UZH7 168 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 HPRT1P00492 218 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 GATA2P23769 480 aaPredicted RBP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 LINC00310P59036 64 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 KRTDAPP60985 99 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 ARF6P62330 175 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 KCNIP4Q6PIL6 250 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 OR10W1Q8NGF6 305 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 OCC1Q8TAD7 63 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 RNASEH2CQ8TDP1 164 aaKnown RBP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 NOL4LQ96MY1 436 aaPredicted RBP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 RPUSD1Q9UJJ7 312 aaKnown RBP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 MDFIC2A0A1B0GVS7 189 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 GGCTO75223 188 aaKnown RBP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 CA1P00915 261 aaPredicted RBP6.18□□□□□ -1.42
TRIM55-202ENST00000315962 GCGP01275 180 aa6.18□□□□□ -1.42
TRIM55-202ENST00000315962 RPL15P61313 204 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms