RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
TUBB3-201ENST00000315491 LBHQ53QV2 105 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-201ENST00000315491 Q71RC1 249 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-201ENST00000315491 FAM71E2Q8N5Q1 922 aa12.84□□□□□ -0.35
TUBB3-201ENST00000315491 OR52E5Q8NH55 327 aa12.84□□□□□ -0.35
TUBB3-201ENST00000315491 MAGT1Q9H0U3 335 aa12.84□□□□□ -0.35
TUBB3-201ENST00000315491 PLA2G2EQ9NZK7 142 aa12.84□□□□□ -0.35
TUBB3-201ENST00000315491 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
TUBB3-201ENST00000315491 MOB4Q9Y3A3 225 aa12.84□□□□□ -0.35
TUBB3-201ENST00000315491 K7EPK0 472 aa12.83□□□□□ -0.36
TUBB3-201ENST00000315491 M0R036 132 aa12.83□□□□□ -0.36
TUBB3-201ENST00000315491 JTBO76095 146 aa12.83□□□□□ -0.36
TUBB3-201ENST00000315491 TNFRSF9Q07011 255 aa12.83□□□□□ -0.36
TUBB3-201ENST00000315491 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.36
TUBB3-201ENST00000315491 ARV1Q9H2C2 271 aa12.83□□□□□ -0.36
TUBB3-201ENST00000315491 GAR1Q9NY12 217 aaKnown RBP12.83□□□□□ -0.36
TUBB3-201ENST00000315491 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.36
TUBB3-201ENST00000315491 A0A1B0GW64 132 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 FCN1O00602 326 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 CA2P00918 260 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 HIST1H1BP16401 226 aaKnown RBP12.82□□□□□ -0.36
TUBB3-201ENST00000315491 SRD5A1P18405 259 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 SPCS3P61009 180 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 RAB4BP61018 213 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 HSPE1P61604 102 aaKnown RBP12.82□□□□□ -0.36
TUBB3-201ENST00000315491 KIAA0141Q14154 515 aaPredicted RBP12.82□□□□□ -0.36
TUBB3-201ENST00000315491 TNXAQ16473 311 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 GUK1Q16774 197 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 FAM24BQ8N5W8 94 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 OR5B3Q8NH48 314 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 ISOC2Q96AB3 205 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 RASL11BQ9BPW5 248 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 COMMD5Q9GZQ3 224 aa12.82□□□□□ -0.36
TUBB3-201ENST00000315491 RCL1Q9Y2P8 373 aaKnown RBP12.82□□□□□ -0.36
TUBB3-201ENST00000315491 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 A0A1B0GV90 55 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 IFITM10A6NMD0 228 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 SEC14L6B5MCN3 397 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 AGPAT2O15120 278 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 HOXA3O43365 443 aaPredicted RBP12.81□□□□□ -0.36
TUBB3-201ENST00000315491 ACTL6BO94805 426 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 TSPAN15O95858 294 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 OPN1MWP04001 364 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 OPN1MW2P0DN77 364 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 OPN1MW3P0DN78 364 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 GNB1P62873 340 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 PDLIM3Q53GG5 364 aaPredicted RBP12.81□□□□□ -0.36
TUBB3-201ENST00000315491 SPINK9Q5DT21 86 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 C16orf82Q7Z2V1 217 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 C5orf56Q8N8D9 126 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 RBKSQ9H477 322 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 INAFM1C9JVW0 142 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 SYNGR2O43760 224 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 SSSCA1O60232 199 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 DEDDO75618 318 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 PKIAP61925 76 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 C10orf55Q5SWW7 151 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 C2orf88Q9BSF0 95 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 VPREB3Q9UKI3 123 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 TLN2Q9Y4G6 2542 aa12.81□□□□□ -0.36
TUBB3-201ENST00000315491 ELOA3CA0A087WX78 387 aaPredicted RBP12.8□□□□□ -0.36
TUBB3-201ENST00000315491 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
TUBB3-201ENST00000315491 CHST1O43916 411 aa12.8□□□□□ -0.36
TUBB3-201ENST00000315491 RPL27AP46776 148 aaKnown RBP12.8□□□□□ -0.36
TUBB3-201ENST00000315491 COMPP49747 757 aaPredicted RBP12.8□□□□□ -0.36
TUBB3-201ENST00000315491 PRCDQ00LT1 54 aa12.8□□□□□ -0.36
TUBB3-201ENST00000315491 HINT2Q9BX68 163 aa12.8□□□□□ -0.36
TUBB3-201ENST00000315491 UMAD1C9J7I0 102 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 LY86O95711 162 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 HLA-DRB1P01911 266 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 IAPPP10997 89 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 SSBP2P81877 361 aaPredicted RBP12.79□□□□□ -0.36
TUBB3-201ENST00000315491 TMEM86BQ8N661 226 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 UBAC2Q8NBM4 344 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 DTD1Q8TEA8 209 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 NDUFA4L2Q9NRX3 87 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 STRAPQ9Y3F4 350 aaKnown RBP12.79□□□□□ -0.36
TUBB3-201ENST00000315491 CGB1A6NKQ9 187 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 E7EUB6 86 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 M0QZK8 103 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 YIF1AO95070 293 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 OR2C1O95371 312 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 CNIH1O95406 144 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 SEC11BP0C7V7 166 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 RD3LP0DJH9 198 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 VAMP2P63027 116 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 CX3CL1P78423 397 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 CLINT1Q14677 625 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 ZNF562Q6V9R5 426 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 RAB40CQ96S21 281 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 PBDC1Q9BVG4 233 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 SLC35B3Q9H1N7 401 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 C11orf1Q9H5F2 150 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 PLEKHA3Q9HB20 300 aa12.79□□□□□ -0.36
TUBB3-201ENST00000315491 NAV3Q8IVL0 2385 aa12.78□□□□□ -0.36
TUBB3-201ENST00000315491 CELSR1Q9NYQ6 3014 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms