RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 OR4C12Q96R67 309 aa9.13□□□□□ -0.95
SCFD1-201ENST00000311943 SEC22CQ9BRL7 303 aa9.13□□□□□ -0.95
SCFD1-201ENST00000311943 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-201ENST00000311943 C21orf62Q9NYP8 219 aa9.13□□□□□ -0.95
SCFD1-201ENST00000311943 IGHV3OR16-13A0A075B7E8 117 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 IGHV3-74A0A0B4J1X5 117 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 A0A0B4J2A0 478 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 TMEM213A2RRL7 107 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 GGCTO75223 188 aaKnown RBP9.12□□□□□ -0.95
SCFD1-201ENST00000311943 DHFRP00374 187 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 CTSGP08311 255 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 OR4E1P0C645 316 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 DHRS2Q13268 280 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 Q56UQ5 140 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 GSG1LQ6UXU4 331 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 LGI3Q8N145 548 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
SCFD1-201ENST00000311943 RBKSQ9H477 322 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 SHPKQ9UHJ6 478 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 C2orf70A6NJV1 201 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 CEBPZOSA8MTT3 80 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 CCSO14618 274 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 IGLV1-51P01701 117 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 TCRBP04435 133 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 IAPPP10997 89 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 HIST1H1BP16401 226 aaKnown RBP9.12□□□□□ -0.95
SCFD1-201ENST00000311943 AARDQ4LEZ3 155 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 GGNBP1Q5YKI7 109 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 PLET1Q6UQ28 207 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 SCGB3A2Q96PL1 93 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 WFDC10AQ9H1F0 79 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 C20orf85Q9H1P6 137 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 NUDT15Q9NV35 164 aa9.12□□□□□ -0.95
SCFD1-201ENST00000311943 TGOLN2O43493 480 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 SULT1A3P0DMM9 295 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 SULT1A4P0DMN0 295 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 FOLR2P14207 255 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 SNCAP37840 140 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 ERHP84090 104 aaKnown RBP9.11□□□□□ -0.95
SCFD1-201ENST00000311943 BSXQ3C1V8 233 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 CD300EQ496F6 205 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-201ENST00000311943 WDR89Q96FK6 387 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-201ENST00000311943 CXorf58Q96LI9 332 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 PDCD10Q9BUL8 212 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 MLXQ9UH92 298 aa9.11□□□□□ -0.95
SCFD1-201ENST00000311943 ZNF256Q9Y2P7 627 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-201ENST00000311943 TRBV7-1A0A0A6YYK4 115 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 PITX3O75364 302 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 CBLN1P23435 193 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 SPCS3P61009 180 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 TNFRSF9Q07011 255 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 SMCO1Q147U7 214 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 C4orf46Q504U0 113 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 ZNF114Q8NC26 417 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 ASCL2Q99929 193 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 C20orf24Q9BUV8 137 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 HEYLQ9NQ87 328 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-201ENST00000311943 LSM4Q9Y4Z0 139 aaKnown RBP9.1□□□□□ -0.95
SCFD1-201ENST00000311943 NAP1L6A6NFF2 107 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 GP9P14770 177 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 THOC7Q6I9Y2 204 aaKnown RBP9.1□□□□□ -0.95
SCFD1-201ENST00000311943 BTNL8Q6UX41 500 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 HSD17B13Q7Z5P4 300 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-201ENST00000311943 Q8N1Y9 231 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 UXS1Q8NBZ7 420 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 VN1R17PQ8TDU5 208 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 IL22RA2Q969J5 263 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 OR10C1Q96KK4 312 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 THYN1Q9P016 225 aa9.1□□□□□ -0.95
SCFD1-201ENST00000311943 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
SCFD1-201ENST00000311943 IGHV3-66A0A0C4DH42 116 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 A0A1B0GU03 582 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 H3BP45 60 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 B3GALNT1O75752 331 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 UPK1BO75841 260 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 ATG12O94817 140 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 APOHP02749 345 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-201ENST00000311943 ANXA3P12429 323 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 PVRIGQ6DKI7 326 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 LYG2Q86SG7 212 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 GPHB5Q86YW7 130 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 LILRB2Q8N423 598 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 LRTM2Q8N967 370 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 CCDC32Q9BV29 185 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 CENPXA8MT69 81 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 SCAF4O95104 1147 aaKnown RBP9.09□□□□□ -0.95
SCFD1-201ENST00000311943 CD7P09564 240 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 OPRK1P41145 380 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 DEFB114Q30KQ6 69 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 SLC24A4Q8NFF2 622 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 DTD1Q8TEA8 209 aa9.09□□□□□ -0.95
SCFD1-201ENST00000311943 ZNF785A8K8V0 405 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 INS-IGF2F8WCM5 200 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 CCNKO75909 580 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 YIF1AO95070 293 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 TMEM50AO95807 157 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 NRARPQ7Z6K4 114 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 TMEM61Q8N0U2 210 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms