RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 KIAA1644Q3SXP7 199 aa20.57■□□□□ 0.88
HOXB3-201ENST00000311626 TMEM200BQ69YZ2 307 aa20.57■□□□□ 0.88
HOXB3-201ENST00000311626 CMTM2Q8TAZ6 248 aa20.57■□□□□ 0.88
HOXB3-201ENST00000311626 TECRQ9NZ01 308 aaKnown RBP20.57■□□□□ 0.88
HOXB3-201ENST00000311626 ZNF257Q9Y2Q1 563 aa20.57■□□□□ 0.88
HOXB3-201ENST00000311626 ADIPOQQ15848 244 aa20.57■□□□□ 0.88
HOXB3-201ENST00000311626 CORO2AQ92828 525 aa20.57■□□□□ 0.88
HOXB3-201ENST00000311626 SNURFLB1AK76 121 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 REG1AP05451 166 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 MGST1P10620 155 aaKnown RBP20.56■□□□□ 0.88
HOXB3-201ENST00000311626 AREGP15514 252 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 RPEL1Q2QD12 228 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 ST6GALNAC3Q8NDV1 305 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 COMMD5Q9GZQ3 224 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 A0A0G2JNJ9 132 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 ZNF705FA8MVS1 300 aaPredicted RBP20.56■□□□□ 0.88
HOXB3-201ENST00000311626 SERF1AO75920 110 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 ZNF705DP0CH99 300 aaPredicted RBP20.56■□□□□ 0.88
HOXB3-201ENST00000311626 ZNF705BP0CI00 300 aaPredicted RBP20.56■□□□□ 0.88
HOXB3-201ENST00000311626 Q9UFV3 132 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 LINC00312Q9Y6C7 94 aa20.56■□□□□ 0.88
HOXB3-201ENST00000311626 H0YJW9 148 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 BSPH1Q075Z2 132 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 C2orf83Q53S99 150 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 TEX36Q5VZQ5 186 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 POLR3KQ9Y2Y1 108 aaPredicted RBP20.55■□□□□ 0.88
HOXB3-201ENST00000311626 CA1P00915 261 aaPredicted RBP20.55■□□□□ 0.88
HOXB3-201ENST00000311626 APELAP0DMC3 54 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 CD69Q07108 199 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 IQCJQ1A5X6 159 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 ZNF833PQ6ZTB9 187 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 FAM57AQ8TBR7 257 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 RITA1Q96K30 269 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 LINC00574Q9H8X3 128 aa20.55■□□□□ 0.88
HOXB3-201ENST00000311626 NKX6-3A6NJ46 265 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 C9JCJ5 164 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 PYYP10082 97 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 CRISP2P16562 243 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 IGHV3-72A0A0B4J1Y9 119 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 PLAUP00749 431 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 ZNF714Q96N38 554 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 TMEM167BQ9NRX6 74 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 SERTAD4Q9NUC0 356 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 BET1LQ9NYM9 111 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 NAGKQ9UJ70 344 aa20.54■□□□□ 0.88
HOXB3-201ENST00000311626 TACC2O95359 2948 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 C17orf100A8MU93 164 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 RAB4BP61018 213 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 TDRG1Q3Y452 100 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 TMEM108Q6UXF1 575 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 BTF3L4Q96K17 158 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 NOL4LQ96MY1 436 aaPredicted RBP20.53■□□□□ 0.88
HOXB3-201ENST00000311626 TPSG1Q9NRR2 321 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 CBLN4Q9NTU7 201 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 MRPL36Q9P0J6 103 aaKnown RBP20.53■□□□□ 0.88
HOXB3-201ENST00000311626 EREGO14944 169 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 APOA2P02652 100 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 RPL8P62917 257 aaKnown RBP20.53■□□□□ 0.88
HOXB3-201ENST00000311626 C3orf36Q3SXR2 165 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 C19orf35Q6ZS72 473 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 Q6ZWC4 215 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 OR10X1Q8NGY0 326 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 NDUFAF3Q9BU61 184 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 FNDC4Q9H6D8 234 aaPredicted RBP20.53■□□□□ 0.88
HOXB3-201ENST00000311626 NDUFA4L2Q9NRX3 87 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 CUL9Q8IWT3 2517 aa20.53■□□□□ 0.88
HOXB3-201ENST00000311626 WT1-ASQ06250 92 aa20.52■□□□□ 0.88
HOXB3-201ENST00000311626 RUSC1-AS1Q66K80 236 aa20.52■□□□□ 0.88
HOXB3-201ENST00000311626 BAGE3Q86Y29 109 aa20.52■□□□□ 0.88
HOXB3-201ENST00000311626 BAGE2Q86Y30 109 aa20.52■□□□□ 0.88
HOXB3-201ENST00000311626 FLYWCH2Q96CP2 140 aaKnown RBP20.52■□□□□ 0.88
HOXB3-201ENST00000311626 SLC35E1Q96K37 410 aa20.52■□□□□ 0.88
HOXB3-201ENST00000311626 SLC25A33Q9BSK2 321 aa20.52■□□□□ 0.88
HOXB3-201ENST00000311626 CGB1A6NKQ9 187 aa20.52■□□□□ 0.87
HOXB3-201ENST00000311626 OR5G3P0C626 314 aa20.52■□□□□ 0.87
HOXB3-201ENST00000311626 OR5B3Q8NH48 314 aa20.52■□□□□ 0.87
HOXB3-201ENST00000311626 TBX15Q96SF7 602 aa20.52■□□□□ 0.87
HOXB3-201ENST00000311626 GAL3ST2Q9H3Q3 398 aa20.52■□□□□ 0.87
HOXB3-201ENST00000311626 MRPL54Q6P161 138 aaKnown RBP20.51■□□□□ 0.87
HOXB3-201ENST00000311626 NPIPB3Q92617 1050 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 SLC25A2Q9BXI2 301 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 SAP30LQ9HAJ7 183 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 ZNF318Q5VUA4 2279 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 TRAV34A0A0B4J273 112 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 C16orf97H3BN30 126 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 CRYABP02511 175 aaKnown RBP20.51■□□□□ 0.87
HOXB3-201ENST00000311626 THBDP07204 575 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 OR1L8Q8NGR8 309 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 ABCA1O95477 2261 aa20.51■□□□□ 0.87
HOXB3-201ENST00000311626 C8orf88P0DMB2 117 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 TNFRSF1AP19438 455 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 CDKN1AP38936 164 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 PRR31Q5SQ13 230 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 OR5AU1Q8NGC0 362 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 HSPB9Q9BQS6 159 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 FAM103A1Q9BTL3 118 aaKnown RBP20.5■□□□□ 0.87
HOXB3-201ENST00000311626 SSBP3Q9BWW4 388 aaPredicted RBP20.5■□□□□ 0.87
HOXB3-201ENST00000311626 APC2O95996 2303 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 IGLV2-8P01709 118 aa20.5■□□□□ 0.87
HOXB3-201ENST00000311626 UBE2L3P68036 154 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms