RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TM4SF20Q53R12 229 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 FAM216BQ8N7L0 139 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 MYO18BQ8IUG5 2567 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 TRAV3A0A0B4J244 114 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 KIR2DL2P43627 348 aaPredicted RBP10.5□□□□□ -0.73
RETREG3-201ENST00000309428 OR1L4Q8NGR5 311 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 IGFBPL1Q8WX77 278 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 TMEM45BQ96B21 275 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 LINC00479Q96M42 142 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 FBXL7Q9UJT9 491 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 OR9G9P0C7N8 305 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 ARL3P36405 182 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 BHLHA15Q7RTS1 189 aaPredicted RBP10.5□□□□□ -0.73
RETREG3-201ENST00000309428 PRSS3P2Q8NHM4 247 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 HES4Q9HCC6 221 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 IGKV3D-15A0A087WSY6 115 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 LINC00473A8K010 186 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 REG1AP05451 166 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 CD24P25063 80 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 MDS2Q8NDY4 140 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 PGLYRP4Q96LB8 373 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 NABP2Q9BQ15 211 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 IL36GQ9NZH8 169 aa10.5□□□□□ -0.73
RETREG3-201ENST00000309428 ERHP84090 104 aaKnown RBP10.49□□□□□ -0.73
RETREG3-201ENST00000309428 MOB3BQ86TA1 216 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 CORO2AQ92828 525 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 SPSB4Q96A44 273 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A10PA6NDY2 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A18PA6NE21 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A16PA6NEW6 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A20PA6NIJ5 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A8PA6NJQ4 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A7PA6NKC0 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A22PA8MWA6 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A12PA8MX19 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A5PA8MXJ8 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A23PA8MXZ1 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A15PP0C7V4 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A13PP0C7W8 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A14PP0C7W9 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A24PP0C7X0 464 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 COLCA1Q6ZS62 124 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 CA2P00918 260 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 SMIM15Q7Z3B0 74 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 STPG4Q8N801 248 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 OR10X1Q8NGY0 326 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 KCNS1Q96KK3 526 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 LINC00470Q9BZP3 86 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 DECR2Q9NUI1 292 aa10.49□□□□□ -0.73
RETREG3-201ENST00000309428 SH2D7A6NKC9 451 aaPredicted RBP10.48□□□□□ -0.73
RETREG3-201ENST00000309428 C3orf79P0CE67 100 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 MLANAQ16655 118 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 HCP5Q6MZN7 132 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 WDR82Q6UXN9 313 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 OR4S2Q8NH73 311 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 TMEM167BQ9NRX6 74 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 LINC00869P0C866 280 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 Q6P435 159 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 Q6ZT83 130 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 FA2HQ7L5A8 372 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 COQ2Q96H96 371 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 EAF1Q96JC9 268 aaPredicted RBP10.48□□□□□ -0.73
RETREG3-201ENST00000309428 GSX1Q9H4S2 264 aaPredicted RBP10.48□□□□□ -0.73
RETREG3-201ENST00000309428 DYNLRB1Q9NP97 96 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 YTHDF2Q9Y5A9 579 aaKnown RBP10.48□□□□□ -0.73
RETREG3-201ENST00000309428 COL4A2P08572 1712 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 CCDC168Q8NDH2 2452 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 FAM90A26D6RGX4 464 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 LYNX1G3V0Z9 82 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 LYNX1P0DP58 116 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 NPPCP23582 126 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 MAS1LP35410 378 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 RIPPLY3P57055 190 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 RNASEH2CQ8TDP1 164 aaKnown RBP10.48□□□□□ -0.73
RETREG3-201ENST00000309428 CXXC4Q9H2H0 198 aa10.48□□□□□ -0.73
RETREG3-201ENST00000309428 LEPROTL1O95214 131 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 KLF3P57682 345 aaPredicted RBP10.47□□□□□ -0.73
RETREG3-201ENST00000309428 TNFAIP6P98066 277 aaPredicted RBP10.47□□□□□ -0.73
RETREG3-201ENST00000309428 RTL8BQ17RB0 113 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 AARDQ4LEZ3 155 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 TMEM14EPQ6UXP3 125 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 WFDC3Q8IUB2 231 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 OR51B2Q9Y5P1 312 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 TRAV5A0A0B4J249 113 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 COL8A1P27658 744 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 SCGB2A2Q13296 93 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 TCF24Q7RTU0 167 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 SVEP1Q4LDE5 3571 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 IGHV2OR16-5A0A0B4J2B6 119 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 HLA-DQA1P01909 254 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 ZNF138P52744 262 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
RETREG3-201ENST00000309428 TRGV10A0A0A0MS01 117 aa10.46□□□□□ -0.73
RETREG3-201ENST00000309428 OR4C46A6NHA9 309 aa10.46□□□□□ -0.73
RETREG3-201ENST00000309428 ZNF324O75467 553 aaPredicted RBP10.46□□□□□ -0.73
RETREG3-201ENST00000309428 PYYP10082 97 aa10.46□□□□□ -0.73
RETREG3-201ENST00000309428 TNFSF4P23510 183 aa10.46□□□□□ -0.73
RETREG3-201ENST00000309428 GNG5P63218 68 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms