RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 P2RX4Q99571 388 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 EIF5A2Q9GZV4 153 aaKnown RBP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 FBXL15Q9H469 300 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 IGHV4-30-2A0A087WSY4 118 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 SEC14L6B5MCN3 397 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 NBR2O15453 112 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 OR13C7P0DN81 318 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 GPX4P36969 197 aaPredicted RBP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 SUB1P53999 127 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 LGALS4P56470 323 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 DSCR9P59020 149 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 PAX8Q06710 450 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 PMS2P11Q13670 270 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 EBI3Q14213 229 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 SSX2Q16385 188 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 ZNF506Q5JVG8 444 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 LCN15Q6UWW0 184 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 PERPQ96FX8 193 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 AJUBAQ96IF1 538 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 ACTR3CQ9C0K3 210 aaPredicted RBP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 LOC102723971A0A1B0GUV8 181 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 TEX22C9J3V5 150 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 YIF1AO95070 293 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 SNRNP70P08621 437 aaKnown RBP9.48□□□□□ -0.89
TRIM40-205ENST00000307859 PPT1P50897 306 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 DEFA5Q01523 94 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 MMDQ15546 238 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 GUCA2BQ16661 112 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 ATRAIDQ6UW56 229 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 SLC16A13Q7RTY0 426 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 SVBPQ8N300 66 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 Q8N6K4 173 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 OR2T10Q8NGZ9 312 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 C17orf50Q8WW18 174 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 NRGNQ92686 78 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 RARRES2Q99969 163 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
TRIM40-205ENST00000307859 SLC25A22Q9H936 323 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 LPAR2Q9HBW0 351 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 SLC39A9Q9NUM3 307 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 PXMP4Q9Y6I8 212 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 JMJD1CQ15652 2540 aa9.48□□□□□ -0.89
TRIM40-205ENST00000307859 CYB5BO43169 146 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 PAX6P26367 422 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 RPL29P47914 159 aaKnown RBP9.47□□□□□ -0.89
TRIM40-205ENST00000307859 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
TRIM40-205ENST00000307859 PRR20EP86478 221 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 PRR20CP86479 221 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 PRR20DP86480 221 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 PRR20BP86481 221 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 PRR20AP86496 221 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 RAB31Q13636 194 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 GAMTQ14353 236 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 ICAM4Q14773 271 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 HAGHQ16775 308 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 FBLN7Q53RD9 439 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 KHDC3LQ587J8 217 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 MIC13Q5XKP0 118 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 SRSF12Q8WXF0 261 aaKnown RBP9.47□□□□□ -0.89
TRIM40-205ENST00000307859 SLC35B3Q9H1N7 401 aa9.47□□□□□ -0.89
TRIM40-205ENST00000307859 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 FCN1O00602 326 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 HSPB1P04792 205 aaKnown RBP9.46□□□□□ -0.89
TRIM40-205ENST00000307859 BCL2P10415 239 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 AREGP15514 252 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 SAA4P35542 130 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 CDC34P49427 236 aaPredicted RBP9.46□□□□□ -0.89
TRIM40-205ENST00000307859 TMEM249Q2WGJ8 235 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 STPG3Q8N7X2 389 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 RAB24Q969Q5 203 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 FNDC4Q9H6D8 234 aaPredicted RBP9.46□□□□□ -0.89
TRIM40-205ENST00000307859 GNG13Q9P2W3 67 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 SLC45A2Q9UMX9 530 aa9.46□□□□□ -0.89
TRIM40-205ENST00000307859 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.46□□□□□ -0.89
TRIM40-205ENST00000307859 STAB1Q9NY15 2570 aa9.46□□□□□ -0.9
TRIM40-205ENST00000307859 NPFFO15130 113 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 SRP19P09132 144 aaKnown RBP9.45□□□□□ -0.9
TRIM40-205ENST00000307859 CD24P25063 80 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 B2MP61769 119 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 GNB1P62873 340 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 PLGLAQ15195 96 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 MLANAQ16655 118 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 C5orf64Q2M2E5 130 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 GCSAMLQ5JQS6 135 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 OR1P1Q8NH06 330 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 SSMEM1Q8WWF3 244 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 SLC35E1Q96K37 410 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 NKX6-2Q9C056 277 aaPredicted RBP9.45□□□□□ -0.9
TRIM40-205ENST00000307859 CENPVL3A0A0U1RRI6 287 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 CORTO00230 105 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 SNAPINO95295 136 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 IFNA1P01562 189 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 REG1AP05451 166 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 CRYGCP07315 174 aa9.45□□□□□ -0.9
TRIM40-205ENST00000307859 LINC00869P0C866 280 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms