RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TMPRSS5Q9H3S3 457 aa17.77■□□□□ 0.44
SMAD1-201ENST00000302085 SLC45A2Q9UMX9 530 aa17.77■□□□□ 0.44
SMAD1-201ENST00000302085 NAV3Q8IVL0 2385 aa17.77■□□□□ 0.44
SMAD1-201ENST00000302085 FBP1P09467 338 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 LINC00869P0C866 280 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 CDC34P49427 236 aaPredicted RBP17.77■□□□□ 0.43
SMAD1-201ENST00000302085 B2MP61769 119 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 PMS2P11Q13670 270 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 EBI3Q14213 229 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 KHDC3LQ587J8 217 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 Q8N6K4 173 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 SRSF12Q8WXF0 261 aaKnown RBP17.77■□□□□ 0.43
SMAD1-201ENST00000302085 KCNIP2Q9NS61 270 aa17.77■□□□□ 0.43
SMAD1-201ENST00000302085 ABCA2Q9BZC7 2435 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 ZFP92A6NM28 416 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 HSPB1P04792 205 aaKnown RBP17.76■□□□□ 0.43
SMAD1-201ENST00000302085 BCL2P10415 239 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 NPBWR1P48145 328 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 PRR20EP86478 221 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 PRR20CP86479 221 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 PRR20DP86480 221 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 PRR20BP86481 221 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 PRR20AP86496 221 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 C19orf35Q6ZS72 473 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 ZNF114Q8NC26 417 aa17.76■□□□□ 0.43
SMAD1-201ENST00000302085 CENPVL3A0A0U1RRI6 287 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 COL8A1P27658 744 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 LRRK2Q5S007 2527 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 SNAPINO95295 136 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 OR10J1P30954 320 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 SAA4P35542 130 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 PIP4P2Q8N4L2 257 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 SLC35E1Q96K37 410 aa17.75■□□□□ 0.43
SMAD1-201ENST00000302085 NPFFO15130 113 aa17.74■□□□□ 0.43
SMAD1-201ENST00000302085 CNIH1O95406 144 aa17.74■□□□□ 0.43
SMAD1-201ENST00000302085 C5orf64Q2M2E5 130 aa17.74■□□□□ 0.43
SMAD1-201ENST00000302085 ACY3Q96HD9 319 aa17.74■□□□□ 0.43
SMAD1-201ENST00000302085 DNASE2O00115 360 aaPredicted RBP17.73■□□□□ 0.43
SMAD1-201ENST00000302085 IGHV3-48P01763 117 aa17.73■□□□□ 0.43
SMAD1-201ENST00000302085 DSCR9P59020 149 aa17.73■□□□□ 0.43
SMAD1-201ENST00000302085 FAM120AOSQ5T036 256 aa17.73■□□□□ 0.43
SMAD1-201ENST00000302085 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.73■□□□□ 0.43
SMAD1-201ENST00000302085 MRPL36Q9P0J6 103 aaKnown RBP17.73■□□□□ 0.43
SMAD1-201ENST00000302085 A0A1W2PPV4 95 aa17.73■□□□□ 0.43
SMAD1-201ENST00000302085 SOHLH1Q5JUK2 328 aa17.73■□□□□ 0.43
SMAD1-201ENST00000302085 CLRN3Q8NCR9 226 aa17.73■□□□□ 0.43
SMAD1-201ENST00000302085 OR1P1Q8NH06 330 aa17.73■□□□□ 0.43
SMAD1-201ENST00000302085 FAM74A7A6NL05 159 aa17.72■□□□□ 0.43
SMAD1-201ENST00000302085 CRYGCP07315 174 aa17.72■□□□□ 0.43
SMAD1-201ENST00000302085 FAM74A3Q4VXF1 159 aa17.72■□□□□ 0.43
SMAD1-201ENST00000302085 NPIPB3Q92617 1050 aa17.72■□□□□ 0.43
SMAD1-201ENST00000302085 MISP3Q96FF7 219 aa17.72■□□□□ 0.43
SMAD1-201ENST00000302085 VAX2Q9UIW0 290 aa17.72■□□□□ 0.43
SMAD1-201ENST00000302085 DMRT1Q9Y5R6 373 aa17.72■□□□□ 0.43
SMAD1-201ENST00000302085 F11RQ9Y624 299 aaKnown RBP17.72■□□□□ 0.43
SMAD1-201ENST00000302085 GATA2P23769 480 aaPredicted RBP17.71■□□□□ 0.43
SMAD1-201ENST00000302085 FXYD3Q14802 87 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 RBMS3Q6XE24 437 aaKnown RBP17.71■□□□□ 0.43
SMAD1-201ENST00000302085 CYB561D1Q8N8Q1 229 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 GATAD1Q8WUU5 269 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 SRSF8Q9BRL6 282 aaKnown RBP17.71■□□□□ 0.43
SMAD1-201ENST00000302085 NUPL2O15504 423 aaKnown RBP17.71■□□□□ 0.43
SMAD1-201ENST00000302085 IFNA1P01562 189 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 TMEM11P17152 192 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 KRTAP10-9P60411 292 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 TMEM249Q2WGJ8 235 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 RUSC1-AS1Q66K80 236 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 SLC35E3Q7Z769 313 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 ABHD5Q8WTS1 349 aa17.71■□□□□ 0.43
SMAD1-201ENST00000302085 ASH1LQ9NR48 2969 aaKnown RBP17.7■□□□□ 0.42
SMAD1-201ENST00000302085 NCBP2LA6PVI3 153 aaKnown RBP17.7■□□□□ 0.42
SMAD1-201ENST00000302085 CLEC12BQ2HXU8 276 aa17.7■□□□□ 0.42
SMAD1-201ENST00000302085 SLC25A33Q9BSK2 321 aa17.7■□□□□ 0.42
SMAD1-201ENST00000302085 SEPSECSQ9HD40 501 aaKnown RBP17.7■□□□□ 0.42
SMAD1-201ENST00000302085 FAM106CPP0CH98 169 aa17.7■□□□□ 0.42
SMAD1-201ENST00000302085 CEBPGP53567 150 aa17.7■□□□□ 0.42
SMAD1-201ENST00000302085 SPATA31B1PQ5VZV4 182 aa17.7■□□□□ 0.42
SMAD1-201ENST00000302085 IGKV1D-37A0A075B6S9 117 aa17.69■□□□□ 0.42
SMAD1-201ENST00000302085 IGHV3OR16-10A0A075B7F0 116 aa17.69■□□□□ 0.42
SMAD1-201ENST00000302085 ETFRF1Q6IPR1 90 aa17.69■□□□□ 0.42
SMAD1-201ENST00000302085 CYP2G1PQ6ZSU1 146 aa17.69■□□□□ 0.42
SMAD1-201ENST00000302085 THAP8Q8NA92 274 aa17.69■□□□□ 0.42
SMAD1-201ENST00000302085 STAG3L2P0CL84 134 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 STAG3L3P0CL85 134 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 BRS3P32247 399 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 RND2P52198 227 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 CX3CL1P78423 397 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 ZNF562Q6V9R5 426 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 IQCF2Q8IXL9 164 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 FAM103A1Q9BTL3 118 aaKnown RBP17.68■□□□□ 0.42
SMAD1-201ENST00000302085 WNT10AQ9GZT5 417 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 TMA7Q9Y2S6 64 aaKnown RBP17.68■□□□□ 0.42
SMAD1-201ENST00000302085 IGHV1-69DA0A0B4J2H0 117 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 IGHV1-69P01742 117 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 MSMBP08118 114 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 RHOBP62745 196 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 SUN5Q8TC36 379 aa17.68■□□□□ 0.42
SMAD1-201ENST00000302085 CTRB1P17538 263 aa17.67■□□□□ 0.42
SMAD1-201ENST00000302085 PSMB3P49720 205 aa17.67■□□□□ 0.42
SMAD1-201ENST00000302085 CD81P60033 236 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms