RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 CTXND1A0A1B0GTU2 59 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 MPDU1O75352 247 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 C20orf24Q9BUV8 137 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 USP9YO00507 2555 aaPredicted RBP20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 PTPN13Q12923 2485 aa20.46■□□□□ 0.87
SDCCAG3-201ENST00000298537 TEX22C9J3V5 150 aa20.46■□□□□ 0.87
SDCCAG3-201ENST00000298537 AKR1C3P42330 323 aa20.46■□□□□ 0.87
SDCCAG3-201ENST00000298537 CYB561D1Q8N8Q1 229 aa20.46■□□□□ 0.87
SDCCAG3-201ENST00000298537 IGHV3OR16-10A0A075B7F0 116 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 IGHV3-21A0A0B4J1V1 117 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 VWC2LB2RUY7 222 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 MBP02144 154 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 CTRB1P17538 263 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 B2MP61769 119 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 ACOT6Q3I5F7 207 aaPredicted RBP20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 CTRB2Q6GPI1 263 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 ACY3Q96HD9 319 aa20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 ACTR3CQ9C0K3 210 aaPredicted RBP20.45■□□□□ 0.87
SDCCAG3-201ENST00000298537 CDC34P49427 236 aaPredicted RBP20.45■□□□□ 0.86
SDCCAG3-201ENST00000298537 SPATA31B1PQ5VZV4 182 aa20.45■□□□□ 0.86
SDCCAG3-201ENST00000298537 CBLN2Q8IUK8 224 aa20.45■□□□□ 0.86
SDCCAG3-201ENST00000298537 COX6B1P14854 86 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 SLC16A13Q7RTY0 426 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 FAM103A1Q9BTL3 118 aaKnown RBP20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 FOXH1O75593 365 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 MOSP00540 346 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 BCL2P10415 239 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 KRTAP10-9P60411 292 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 FAM120AOSQ5T036 256 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 CLEC2AQ6UVW9 174 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 TMEM144Q7Z5S9 345 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 PIP4P2Q8N4L2 257 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 SRSF12Q8WXF0 261 aaKnown RBP20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 DMRT1Q9Y5R6 373 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 ABCA12Q86UK0 2595 aa20.44■□□□□ 0.86
SDCCAG3-201ENST00000298537 NBR2O15453 112 aa20.43■□□□□ 0.86
SDCCAG3-201ENST00000298537 LINC00869P0C866 280 aa20.43■□□□□ 0.86
SDCCAG3-201ENST00000298537 OR10J1P30954 320 aa20.43■□□□□ 0.86
SDCCAG3-201ENST00000298537 TENM4Q6N022 2769 aa20.43■□□□□ 0.86
SDCCAG3-201ENST00000298537 CLRN3Q8NCR9 226 aa20.43■□□□□ 0.86
SDCCAG3-201ENST00000298537 SEPSECSQ9HD40 501 aaKnown RBP20.43■□□□□ 0.86
SDCCAG3-201ENST00000298537 CYB5BO43169 146 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 SAA4P35542 130 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 ABHD5Q8WTS1 349 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 UBE2E1P51965 193 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 PRR20EP86478 221 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 PRR20CP86479 221 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 PRR20DP86480 221 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 PRR20BP86481 221 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 PRR20AP86496 221 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 MISP3Q96FF7 219 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 SLC45A2Q9UMX9 530 aa20.42■□□□□ 0.86
SDCCAG3-201ENST00000298537 SEC14L6B5MCN3 397 aa20.41■□□□□ 0.86
SDCCAG3-201ENST00000298537 SNAPINO95295 136 aa20.41■□□□□ 0.86
SDCCAG3-201ENST00000298537 RNF5Q99942 180 aa20.41■□□□□ 0.86
SDCCAG3-201ENST00000298537 KHDC3LQ587J8 217 aa20.41■□□□□ 0.86
SDCCAG3-201ENST00000298537 SOHLH1Q5JUK2 328 aa20.41■□□□□ 0.86
SDCCAG3-201ENST00000298537 NPIPB3Q92617 1050 aa20.41■□□□□ 0.86
SDCCAG3-201ENST00000298537 ANKRD17O75179 2603 aaKnown RBP20.4■□□□□ 0.86
SDCCAG3-201ENST00000298537 HSPB1P04792 205 aaKnown RBP20.4■□□□□ 0.86
SDCCAG3-201ENST00000298537 RPL29P47914 159 aaKnown RBP20.4■□□□□ 0.86
SDCCAG3-201ENST00000298537 MINOS1Q5TGZ0 78 aa20.4■□□□□ 0.86
SDCCAG3-201ENST00000298537 MINOS1-NBL1R4GNA1 71 aa20.4■□□□□ 0.86
SDCCAG3-201ENST00000298537 CENPVL3A0A0U1RRI6 287 aa20.39■□□□□ 0.86
SDCCAG3-201ENST00000298537 FNDC10F2Z333 226 aa20.39■□□□□ 0.86
SDCCAG3-201ENST00000298537 NDUFA3O95167 84 aa20.39■□□□□ 0.86
SDCCAG3-201ENST00000298537 ATP5IP56385 69 aaPredicted RBP20.39■□□□□ 0.86
SDCCAG3-201ENST00000298537 NPBQ8NG41 125 aa20.39■□□□□ 0.86
SDCCAG3-201ENST00000298537 PUS1Q9Y606 427 aaKnown RBP eCLIP20.39■□□□□ 0.86
SDCCAG3-201ENST00000298537 KMT2BQ9UMN6 2715 aaPredicted RBP20.39■□□□□ 0.85
SDCCAG3-201ENST00000298537 A0A1W2PPV4 95 aa20.39■□□□□ 0.85
SDCCAG3-201ENST00000298537 CNIH1O95406 144 aa20.39■□□□□ 0.85
SDCCAG3-201ENST00000298537 TSPAN4O14817 238 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 SOX15O60248 233 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 MAS1LP35410 378 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 AWAT1Q58HT5 328 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 OR2T10Q8NGZ9 312 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 IGKV1D-37A0A075B6S9 117 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 NCBP2LA6PVI3 153 aaKnown RBP20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 CD81P60033 236 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 ZNF90Q03938 601 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 SLC35E1Q96K37 410 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 SLC25A33Q9BSK2 321 aa20.38■□□□□ 0.85
SDCCAG3-201ENST00000298537 GPX4P36969 197 aaPredicted RBP20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 SUB1P53999 127 aaKnown RBP eCLIP20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 PAX8Q06710 450 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 C5orf64Q2M2E5 130 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 Q8N6K4 173 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 RNASEH2CQ8TDP1 164 aaKnown RBP20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 POLR3KQ9Y2Y1 108 aaPredicted RBP20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 SOX21Q9Y651 276 aaPredicted RBP20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 ARL14EPLP0DKL9 152 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 NDPQ00604 133 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 RAB31Q13636 194 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 CCDC144NLQ6NUI1 221 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 CACNG8Q8WXS5 425 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 SMDT1Q9H4I9 107 aa20.37■□□□□ 0.85
SDCCAG3-201ENST00000298537 M0R036 132 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 NDUFS8O00217 210 aa20.36■□□□□ 0.85
SDCCAG3-201ENST00000298537 PAGE4O60829 102 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms