RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 RBP4P02753 201 aa19.33■□□□□ 0.68
TRIM54-201ENST00000296098 TRGC1P0CF51 173 aa19.33■□□□□ 0.68
TRIM54-201ENST00000296098 RITA1Q96K30 269 aa19.33■□□□□ 0.68
TRIM54-201ENST00000296098 TECRQ9NZ01 308 aaKnown RBP19.33■□□□□ 0.68
TRIM54-201ENST00000296098 ARL2-SNX15V9GYD0 113 aa19.33■□□□□ 0.68
TRIM54-201ENST00000296098 OR5G3P0C626 314 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 SRP14P37108 136 aaKnown RBP19.32■□□□□ 0.68
TRIM54-201ENST00000296098 DLX1P56177 255 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 OR2T6Q8NHC8 308 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 PPIAL4CA0A0B4J2A2 164 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 PHOX2AO14813 284 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 PPIAL4GP0DN37 164 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 CDX1P47902 265 aaPredicted RBP19.32■□□□□ 0.68
TRIM54-201ENST00000296098 ZNF114Q8NC26 417 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 OR8B3Q8NGG8 313 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 C11orf52Q96A22 123 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 UHRF2Q96PU4 802 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 OR8B2Q96RD0 313 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 TMEM167BQ9NRX6 74 aa19.32■□□□□ 0.68
TRIM54-201ENST00000296098 TRBV20OR9-2A0A075B6H5 130 aa19.31■□□□□ 0.68
TRIM54-201ENST00000296098 PSG5Q15238 335 aa19.31■□□□□ 0.68
TRIM54-201ENST00000296098 MRGPRG-AS1Q2M3A8 158 aa19.31■□□□□ 0.68
TRIM54-201ENST00000296098 BEND2Q8NDZ0 799 aa19.31■□□□□ 0.68
TRIM54-201ENST00000296098 C8orf46Q8TAG6 207 aa19.31■□□□□ 0.68
TRIM54-201ENST00000296098 AURKAIP1Q9NWT8 199 aaPredicted RBP19.31■□□□□ 0.68
TRIM54-201ENST00000296098 ANKHD1Q8IWZ3 2542 aaKnown RBP19.3■□□□□ 0.68
TRIM54-201ENST00000296098 A0A1W2PPI3 338 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 A0A1W2PPQ1 181 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 TAS2R45P59539 299 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 KCNIP4Q6PIL6 250 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 TEX45Q8NA69 505 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 PGPEP1LA6NFU8 196 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 PPP5D1E7EU14 171 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 BUB1B-PAK6H3BSN5 160 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 PPP1R2P9O14990 202 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 C1QTNF9P0C862 333 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 AREGP15514 252 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 PRB3Q04118 309 aaPredicted RBP19.3■□□□□ 0.68
TRIM54-201ENST00000296098 PQLC2Q6ZP29 291 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 RAB1BQ9H0U4 201 aa19.3■□□□□ 0.68
TRIM54-201ENST00000296098 FNDC4Q9H6D8 234 aaPredicted RBP19.3■□□□□ 0.68
TRIM54-201ENST00000296098 IGHV1-3A0A0C4DH29 117 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 GGCTO75223 188 aaKnown RBP19.29■□□□□ 0.68
TRIM54-201ENST00000296098 C4orf17Q53FE4 359 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 MRPL41Q8IXM3 137 aaKnown RBP19.29■□□□□ 0.68
TRIM54-201ENST00000296098 OR2T10Q8NGZ9 312 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 MIOXQ9UGB7 285 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 SPTA1P02549 2419 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 OR7C2O60412 319 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 COX7A1P24310 79 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 MMD2Q8IY49 270 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 MRPL32Q9BYC8 188 aaKnown RBP19.29■□□□□ 0.68
TRIM54-201ENST00000296098 AMMECR1Q9Y4X0 333 aaPredicted RBP19.29■□□□□ 0.68
TRIM54-201ENST00000296098 INSIG2Q9Y5U4 225 aa19.29■□□□□ 0.68
TRIM54-201ENST00000296098 ELOA3CA0A087WX78 387 aaPredicted RBP19.28■□□□□ 0.68
TRIM54-201ENST00000296098 MDFIC2A0A1B0GVS7 189 aa19.28■□□□□ 0.68
TRIM54-201ENST00000296098 PRSS8Q16651 343 aa19.28■□□□□ 0.68
TRIM54-201ENST00000296098 ZNF503Q96F45 646 aa19.28■□□□□ 0.68
TRIM54-201ENST00000296098 SFRP2Q96HF1 295 aa19.28■□□□□ 0.68
TRIM54-201ENST00000296098 CBLN4Q9NTU7 201 aa19.28■□□□□ 0.68
TRIM54-201ENST00000296098 IFITM10A6NMD0 228 aa19.27■□□□□ 0.68
TRIM54-201ENST00000296098 SSBP2P81877 361 aaPredicted RBP19.27■□□□□ 0.68
TRIM54-201ENST00000296098 CLEC12BQ2HXU8 276 aa19.27■□□□□ 0.68
TRIM54-201ENST00000296098 OR4X1Q8NH49 305 aa19.27■□□□□ 0.68
TRIM54-201ENST00000296098 RNF2Q99496 336 aa19.27■□□□□ 0.68
TRIM54-201ENST00000296098 CHODLQ9H9P2 273 aa19.27■□□□□ 0.68
TRIM54-201ENST00000296098 IGLC7A0M8Q6 106 aa19.27■□□□□ 0.67
TRIM54-201ENST00000296098 REG1AP05451 166 aa19.27■□□□□ 0.67
TRIM54-201ENST00000296098 FAM3BP58499 235 aaPredicted RBP19.27■□□□□ 0.67
TRIM54-201ENST00000296098 TMEM37Q8WXS4 190 aa19.27■□□□□ 0.67
TRIM54-201ENST00000296098 ONECUT1Q9UBC0 465 aa19.27■□□□□ 0.67
TRIM54-201ENST00000296098 PSMB11A5LHX3 300 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 CRYGBP07316 175 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 C8orf88P0DMB2 117 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 CNTFRP26992 372 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 RPL27AP46776 148 aaKnown RBP19.26■□□□□ 0.67
TRIM54-201ENST00000296098 TNXAQ16473 311 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 NPIPB3Q92617 1050 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 RPEQ96AT9 228 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 TIMD4Q96H15 378 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 SLC25A33Q9BSK2 321 aa19.26■□□□□ 0.67
TRIM54-201ENST00000296098 LY6HO94772 140 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 LIPFP07098 398 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 IMMP2LQ96T52 175 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 TCRBV4S1A1TA0A5B7 111 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 C9JCJ5 164 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 TYMSP04818 313 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 THAP8Q8NA92 274 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 OCC1Q8TAD7 63 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 SIGLEC9Q9Y336 463 aa19.25■□□□□ 0.67
TRIM54-201ENST00000296098 S100A2P29034 98 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 LCN2P80188 198 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 C11orf71Q6IPW1 123 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 HIST3H2BBQ8N257 126 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 LY6G5BQ8NDX9 201 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 GAR1Q9NY12 217 aaKnown RBP19.24■□□□□ 0.67
TRIM54-201ENST00000296098 MALRD1Q5VYJ5 2156 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 COX7A2P2O60397 106 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 SOD3P08294 240 aa19.24■□□□□ 0.67
TRIM54-201ENST00000296098 HNF1AP20823 631 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms