RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 CD300EQ496F6 205 aaPredicted RBP9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 MLNRO43193 412 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 NABP1Q96AH0 204 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 WFDC6Q9BQY6 131 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 MS4A5Q9H3V2 200 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 IGHV3OR16-13A0A075B7E8 117 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 IGHV3-74A0A0B4J1X5 117 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 F8VVB4 439 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 F8VWA3 439 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 RNASE4P34096 147 aaKnown RBP9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 LY6G6FQ5SQ64 297 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 LRP5O75197 1615 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 C9JAW5 83 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 SHISA3A0PJX4 238 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 DEFB109BQ30KR1 87 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 SCRT1Q9BWW7 348 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 PLXNA1Q9UIW2 1896 aa9.99□□□□□ -0.81
SHROOM3-201ENST00000296043 IGHV3-49A0A0A0MS15 119 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 PSMG4Q5JS54 123 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 Q96M66 194 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 GDF15Q99988 308 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 C1orf100Q5SVJ3 147 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 PPDPFLQ8WWR9 84 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 COL22A1Q8NFW1 1626 aaPredicted RBP9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 K7EP34 96 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 PLXNB2O15031 1838 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 OBSL1O75147 1896 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 LIMS1P48059 325 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 SOX8P57073 446 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 CCL7P80098 99 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 A0A1B0GTI1 187 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 K7EQS6 105 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 FGF16O43320 207 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 NOVP48745 357 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 YBX2Q9Y2T7 364 aaKnown RBP9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 UPK3AO75631 287 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 RSPO2Q6UXX9 243 aaPredicted RBP9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 IGHV3-66A0A0C4DH42 116 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 GREM1O60565 184 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 PCSK4Q6UW60 755 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 RAX2Q96IS3 184 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 K7EP13 123 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 ATP5L2Q7Z4Y8 100 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 C19orf24Q9BVV8 132 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 C3orf79P0CE67 100 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 IL11P20809 199 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 SFXN3Q9BWM7 321 aa9.98□□□□□ -0.81
SHROOM3-201ENST00000296043 CEACAM4O75871 244 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 ASPHD2Q6ICH7 369 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 C17orf99Q6UX52 265 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 CD5LO43866 347 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 Q6ZNB5 142 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 VN1R4Q7Z5H5 301 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 TRAV8-3A0A0A6YYJ7 113 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 GLRXP35754 106 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 EXPH5Q8NEV8 1989 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 LHX8Q68G74 356 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 IGHV3-35A0A0C4DH35 117 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 BMPERQ8N8U9 685 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 MVB12AQ96EY5 273 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 SLC25A20O43772 301 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 GUSBP11Q6P575 273 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 Q9H3A6 140 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 FGF12P61328 243 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 OCC1Q8TAD7 63 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 RICTORQ6R327 1708 aa9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 KLF17Q5JT82 389 aaPredicted RBP9.97□□□□□ -0.81
SHROOM3-201ENST00000296043 CELA3AP09093 270 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 HEXA-AS1Q9H8Q6 139 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 C9orf118A6NHY6 69 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 SPEM1Q8N4L4 309 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 SPANXA1Q9NS26 97 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 DEPPQ9NTK1 212 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE12JA6NER3 117 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE7O76087 117 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE12FP0CL80 117 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE12GP0CL81 117 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE12IP0CL82 117 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 GAGE4Q13068 117 aa9.96□□□□□ -0.81
SHROOM3-201ENST00000296043 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 GATA2P23769 480 aaPredicted RBP9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 TNFRSF18Q9Y5U5 241 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 S4R3C0 116 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 TRAV13-1A0A0B4J241 112 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 FAM89BQ8N5H3 189 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 GATD1Q8NB37 220 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 C1RLQ9NZP8 487 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 CEACAM8P31997 349 aaPredicted RBP9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 RPL39P5Q59GN2 51 aa9.96□□□□□ -0.82
SHROOM3-201ENST00000296043 H3BMM0 161 aa9.95□□□□□ -0.82
SHROOM3-201ENST00000296043 ASIPP42127 132 aa9.95□□□□□ -0.82
SHROOM3-201ENST00000296043 ZNF525Q8N782 197 aa9.95□□□□□ -0.82
SHROOM3-201ENST00000296043 UBE2WQ96B02 151 aa9.95□□□□□ -0.82
SHROOM3-201ENST00000296043 CHAC1Q9BUX1 264 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms