RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 IGKV1D-13A0A0B4J2D9 117 aa14.71□□□□□ -0.05
CDC42EP3-201ENST00000295324 IGKV1-13P0DP09 117 aa14.71□□□□□ -0.05
CDC42EP3-201ENST00000295324 RHOGP84095 191 aa14.71□□□□□ -0.05
CDC42EP3-201ENST00000295324 C2orf68Q2NKX9 166 aa14.71□□□□□ -0.05
CDC42EP3-201ENST00000295324 OR1N2Q8NGR9 330 aa14.71□□□□□ -0.05
CDC42EP3-201ENST00000295324 DUTP33316 252 aaKnown RBP14.71□□□□□ -0.05
CDC42EP3-201ENST00000295324 NMUP48645 174 aa14.71□□□□□ -0.05
CDC42EP3-201ENST00000295324 M0R1W7 72 aa14.71□□□□□ -0.06
CDC42EP3-201ENST00000295324 TMEM200BQ69YZ2 307 aa14.71□□□□□ -0.06
CDC42EP3-201ENST00000295324 LHFPL5Q8TAF8 219 aa14.71□□□□□ -0.06
CDC42EP3-201ENST00000295324 DMRTA2Q96SC8 542 aa14.71□□□□□ -0.06
CDC42EP3-201ENST00000295324 A0A0B4J293 547 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 LOC389332A0A1B0GUA5 103 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 CEACAM4O75871 244 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 SCGB1A1P11684 91 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 FAM3BP58499 235 aaPredicted RBP14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 EFNB1P98172 346 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 DANCRP0C864 163 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 SELLP14151 372 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 PLAURQ03405 335 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 USF3Q68DE3 2245 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 TMEM144Q7Z5S9 345 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 C11orf44Q8N8P7 122 aa14.7□□□□□ -0.06
CDC42EP3-201ENST00000295324 A0A087WV48 116 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 FAM74A4Q5TZK3 123 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 ZNF600Q6ZNG1 722 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 RAB37Q96AX2 223 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 SH3BGRL3Q9H299 93 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 IGHV3OR16-8A0A075B7F1 116 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 LINC01356Q8N9X3 169 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 GPR82Q96P67 336 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 SRSF7Q16629 238 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 PVRIGQ6DKI7 326 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 CLDN16Q9Y5I7 305 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 ZNF98A6NK75 572 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 NMBP08949 121 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 ZNF56Q15929 161 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 NSUN5P1Q3KNT7 163 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 TMEM155Q4W5P6 130 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 OR52E5Q8NH55 327 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 SGK494Q96LW2 274 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 PNRC2Q9NPJ4 139 aaKnown RBP14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 E7EQL1 145 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 GPR61Q9BZJ8 451 aa14.69□□□□□ -0.06
CDC42EP3-201ENST00000295324 RPRMQ9NS64 109 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 HEATR1Q9H583 2144 aaKnown RBP14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 HLA-DQA1P01909 254 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 HLA-DRB1P01911 266 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 TCTAP57738 103 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 ZNF324BQ6AW86 544 aaPredicted RBP14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 FOXL2NBQ6ZUU3 175 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 MIEN1Q9BRT3 115 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 BPESC1Q9GZL8 116 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 TRAV41A0A0B4J266 112 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 C2orf83Q53S99 150 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 PGLYRP4Q96LB8 373 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 RNF5Q99942 180 aa14.68□□□□□ -0.06
CDC42EP3-201ENST00000295324 BTF3P20290 206 aaKnown RBP14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 PCNX2A6NKB5 2137 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 F12P00748 615 aaPredicted RBP14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 CEACAM8P31997 349 aaPredicted RBP14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 TPTE2P1Q5T6R2 138 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 DUX3Q96PT4 197 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 EIF3GO75821 320 aaKnown RBP eCLIP14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 TMEM238LA0A1B0GVL6 79 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 A6NJY4 79 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 FAM90A9PA6NNJ1 464 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 PSPNO60542 156 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 CD177Q8N6Q3 437 aa14.67□□□□□ -0.06
CDC42EP3-201ENST00000295324 PSMB11A5LHX3 300 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 GAGE10A6NGK3 116 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 A6NNC1 897 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 C9JCJ5 164 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 SRD5A1P18405 259 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 NR2C2APQ86WQ0 139 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 ZNF502Q8TBZ5 544 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 PRCDQ00LT1 54 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 LDLRAD2Q5SZI1 272 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 TCF24Q7RTU0 167 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 H3BUX3 64 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 NPFFO15130 113 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 TMEM42Q69YG0 159 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 ETV2O00321 342 aaPredicted RBP14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 COL8A2P25067 703 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 NEUROG1Q92886 237 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 RCC1LQ96I51 464 aaKnown RBP14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 MAP1LC3AQ9H492 121 aa14.66□□□□□ -0.06
CDC42EP3-201ENST00000295324 TRAV14DV4A0A0A6YYC5 116 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 TMEM250H0YL14 139 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 OTX1P32242 354 aaPredicted RBP14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 UQCRFS1P47985 274 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 HERPUD1Q15011 391 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 PLP1P60201 277 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 STHQ8IWL8 128 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 IGKV1-27A0A075B6S5 117 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 FABP2P12104 132 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 ZNF525Q8N782 197 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 LINC01587Q99440 93 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 H7C1H1 209 aa14.65□□□□□ -0.06
CDC42EP3-201ENST00000295324 DPH3Q96FX2 82 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms