RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 CCL13Q99616 98 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 DSPP15924 2871 aaKnown RBP12.05□□□□□ -0.48
CCNF-201ENST00000293968 FAM90A9PA6NNJ1 464 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 IGLC2P0DOY2 106 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 IGLC3P0DOY3 106 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 TMPRSS3P57727 454 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 LOXL3P58215 753 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 TNXAQ16473 311 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 PRNDQ9UKY0 176 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
CCNF-201ENST00000293968 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 TNRC6BQ9UPQ9 1833 aaKnown RBP12.05□□□□□ -0.48
CCNF-201ENST00000293968 H3BTX0 84 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 TOX4O94842 621 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 LINC00614P0C842 121 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 PRRX1P54821 245 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
CCNF-201ENST00000293968 UBE2G1P62253 170 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 UBALD2Q8IYN6 164 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 RBMXL3Q8N7X1 1067 aaKnown RBP12.05□□□□□ -0.48
CCNF-201ENST00000293968 CLEC7AQ9BXN2 247 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 PCSK5Q92824 1860 aa12.05□□□□□ -0.48
CCNF-201ENST00000293968 APELAP0DMC3 54 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 GNG5P63218 68 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 PRR20EP86478 221 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 PRR20CP86479 221 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 PRR20DP86480 221 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 PRR20BP86481 221 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 PRR20AP86496 221 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 GAGE1Q13065 139 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 TRGV8A0A0C4DH27 118 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 ESDP10768 282 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 BET1LQ9NYM9 111 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 IGKV1OR2-108A0A075B7D4 117 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 CLEC5AQ9NY25 188 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 IGHV1-18A0A0C4DH31 117 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 VAMP3Q15836 100 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 MORN5Q5VZ52 161 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 FOXA2Q9Y261 457 aaPredicted RBP12.04□□□□□ -0.48
CCNF-201ENST00000293968 LY96Q9Y6Y9 160 aa12.04□□□□□ -0.48
CCNF-201ENST00000293968 A0A1W2PN81 502 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 SRRM5B3KS81 715 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 M0QZ24 198 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 PRB4P10163 310 aaPredicted RBP12.03□□□□□ -0.48
CCNF-201ENST00000293968 ORM2P19652 201 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 CD24P25063 80 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 ZNF137PP52743 207 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 SLC25A10Q9UBX3 287 aaPredicted RBP12.03□□□□□ -0.48
CCNF-201ENST00000293968 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
CCNF-201ENST00000293968 ISLRO14498 428 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
CCNF-201ENST00000293968 NIT1Q86X76 327 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 PROCRQ9UNN8 238 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 IGHV3-21A0A0B4J1V1 117 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 IGKV3-15P01624 115 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 COX19Q49B96 90 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 SNRNP40Q96DI7 357 aaKnown RBP12.03□□□□□ -0.48
CCNF-201ENST00000293968 OR8B2Q96RD0 313 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 PAXXQ9BUH6 204 aa12.03□□□□□ -0.48
CCNF-201ENST00000293968 C18orf32Q8TCD1 76 aa12.02□□□□□ -0.48
CCNF-201ENST00000293968 ZNF503Q96F45 646 aa12.02□□□□□ -0.48
CCNF-201ENST00000293968 GVINP1Q7Z2Y8 2422 aa12.02□□□□□ -0.48
CCNF-201ENST00000293968 SH2D7A6NKC9 451 aaPredicted RBP12.02□□□□□ -0.49
CCNF-201ENST00000293968 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
CCNF-201ENST00000293968 PPOXP50336 477 aa12.02□□□□□ -0.49
CCNF-201ENST00000293968 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.49
CCNF-201ENST00000293968 NEUROG1Q92886 237 aa12.02□□□□□ -0.49
CCNF-201ENST00000293968 HARBI1Q96MB7 349 aa12.02□□□□□ -0.49
CCNF-201ENST00000293968 REG1AP05451 166 aa12.02□□□□□ -0.49
CCNF-201ENST00000293968 C10orf113Q5VZT2 155 aa12.02□□□□□ -0.49
CCNF-201ENST00000293968 BHLHA15Q7RTS1 189 aaPredicted RBP12.02□□□□□ -0.49
CCNF-201ENST00000293968 MRPL52Q86TS9 123 aaKnown RBP12.02□□□□□ -0.49
CCNF-201ENST00000293968 FAM90A1Q86YD7 464 aa12.02□□□□□ -0.49
CCNF-201ENST00000293968 Q8N976 141 aa12.02□□□□□ -0.49
CCNF-201ENST00000293968 KBTBD11-OT1A0A1B0GTJ5 212 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 TEX50A0A1B0GTY4 177 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 LNP1A1A4G5 178 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 MMP23AO75900 390 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 KLF3P57682 345 aaPredicted RBP12.01□□□□□ -0.49
CCNF-201ENST00000293968 RELQ04864 619 aaPredicted RBP12.01□□□□□ -0.49
CCNF-201ENST00000293968 NPIPB3Q92617 1050 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 TP73-AS1Q9UF72 201 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 SRRM4A7MD48 611 aaKnown RBP12.01□□□□□ -0.49
CCNF-201ENST00000293968 HIGD1CA8MV81 97 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 CORTO00230 105 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 NKX2-8O15522 239 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 SAA1P0DJI8 122 aaPredicted RBP12.01□□□□□ -0.49
CCNF-201ENST00000293968 TSPOP30536 169 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 C19orf35Q6ZS72 473 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 SLC25A33Q9BSK2 321 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 TCF24Q7RTU0 167 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 RAB9BQ9NP90 201 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 RNF24Q9Y225 148 aa12.01□□□□□ -0.49
CCNF-201ENST00000293968 UPK2O00526 184 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms