RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SRSF2Q01130 221 aaKnown RBP14.08□□□□□ -0.15
CCDC78-201ENST00000293889 NHLH2Q02577 135 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 BAXQ07812 192 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 TNXAQ16473 311 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 RNF212Q495C1 297 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 C10orf55Q5SWW7 151 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 BIN3Q9NQY0 253 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 FKBP11Q9NYL4 201 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 ACTL6BO94805 426 aa14.08□□□□□ -0.16
CCDC78-201ENST00000293889 MAS1LP35410 378 aa14.08□□□□□ -0.16
CCDC78-201ENST00000293889 COMPP49747 757 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-201ENST00000293889 BLCAPP62952 87 aa14.08□□□□□ -0.16
CCDC78-201ENST00000293889 COMMD5Q9GZQ3 224 aa14.08□□□□□ -0.16
CCDC78-201ENST00000293889 HSPB7Q9UBY9 170 aa14.08□□□□□ -0.16
CCDC78-201ENST00000293889 TET2Q6N021 2002 aaPredicted RBP14.07□□□□□ -0.16
CCDC78-201ENST00000293889 E7EUB6 86 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 CLDN34H7C241 214 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 IFNA17P01571 189 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 HILS1P60008 231 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 HSPE1P61604 102 aaKnown RBP14.07□□□□□ -0.16
CCDC78-201ENST00000293889 CX3CL1P78423 397 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 TNFRSF9Q07011 255 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 SPINK9Q5DT21 86 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 ZNF562Q6V9R5 426 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 TMEM252Q8N6L7 170 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 RXFP4Q8TDU9 374 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 HSPB9Q9BQS6 159 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 PBDC1Q9BVG4 233 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 ZNF257Q9Y2Q1 563 aa14.07□□□□□ -0.16
CCDC78-201ENST00000293889 IGHV7-81A0A0B4J1V7 117 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 IGSF23A1L1A6 192 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 CGB1A6NKQ9 187 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 FAM90A26D6RGX4 464 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 TCF21O43680 179 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 CNIH1O95406 144 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 CRYBA1P05813 215 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 NDPQ00604 133 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 FXYD3Q14802 87 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 OR1L8Q8NGR8 309 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 OR5B3Q8NH48 314 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 OR52E5Q8NH55 327 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 MAGT1Q9H0U3 335 aa14.06□□□□□ -0.16
CCDC78-201ENST00000293889 FAM24AA6NFZ4 105 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 AGPAT2O15120 278 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 IFNA4P05014 189 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 RPL27AP46776 148 aaKnown RBP14.05□□□□□ -0.16
CCDC78-201ENST00000293889 SPCS3P61009 180 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 POLR2GP62487 172 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC78-201ENST00000293889 PDLIM3Q53GG5 364 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-201ENST00000293889 DPPA3Q6W0C5 159 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 Q6ZS46 218 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 HINT2Q9BX68 163 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 RBKSQ9H477 322 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 NDUFA4L2Q9NRX3 87 aa14.05□□□□□ -0.16
CCDC78-201ENST00000293889 C9orf152Q5JTZ5 239 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 SRSF12Q8WXF0 261 aaKnown RBP14.04□□□□□ -0.16
CCDC78-201ENST00000293889 GNPNAT1Q96EK6 184 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-201ENST00000293889 SLC35B3Q9H1N7 401 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 SH3BGRL3Q9H299 93 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 LINC01548A6NM66 108 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 RNASE1P07998 156 aaKnown RBP14.04□□□□□ -0.16
CCDC78-201ENST00000293889 ATP6V0CP27449 155 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 PRCDQ00LT1 54 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 ZNF616Q08AN1 781 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 RHEBQ15382 184 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 OR10W1Q8NGF6 305 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 ARPC1AQ92747 370 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 JMJD8Q96S16 334 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 SAV1Q9H4B6 383 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-201ENST00000293889 FBXO7Q9Y3I1 522 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 ATRQ13535 2644 aa14.04□□□□□ -0.16
CCDC78-201ENST00000293889 FAM181BA6NEQ2 426 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 CEBPZOSA8MTT3 80 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 TEX22C9J3V5 150 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 SYNGR2O43760 224 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 MT-ND4LP03901 98 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 EGR2P11161 476 aaPredicted RBP14.03□□□□□ -0.16
CCDC78-201ENST00000293889 PPT1P50897 306 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 PAX9P55771 341 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 VAMP2P63027 116 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 IQCF2Q8IXL9 164 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 HSD17B11Q8NBQ5 300 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 FAM103A1Q9BTL3 118 aaKnown RBP14.03□□□□□ -0.16
CCDC78-201ENST00000293889 NPFFR1Q9GZQ6 430 aa14.03□□□□□ -0.16
CCDC78-201ENST00000293889 SSSCA1O60232 199 aa14.02□□□□□ -0.16
CCDC78-201ENST00000293889 IGHG2P01859 326 aa14.02□□□□□ -0.16
CCDC78-201ENST00000293889 PRH1P02810 166 aa14.02□□□□□ -0.16
CCDC78-201ENST00000293889 SPSB3Q6PJ21 355 aa14.02□□□□□ -0.16
CCDC78-201ENST00000293889 ABHD5Q8WTS1 349 aa14.02□□□□□ -0.16
CCDC78-201ENST00000293889 HIST1H2BAQ96A08 127 aa14.02□□□□□ -0.16
CCDC78-201ENST00000293889 PLEKHA3Q9HB20 300 aa14.02□□□□□ -0.16
CCDC78-201ENST00000293889 FBN1P35555 2871 aaKnown RBP14.02□□□□□ -0.17
CCDC78-201ENST00000293889 C7orf77A4D0Y5 90 aa14.01□□□□□ -0.17
CCDC78-201ENST00000293889 WRBO00258 174 aa14.01□□□□□ -0.17
CCDC78-201ENST00000293889 ATP6V0E1O15342 81 aa14.01□□□□□ -0.17
CCDC78-201ENST00000293889 TMEM50AO95807 157 aa14.01□□□□□ -0.17
CCDC78-201ENST00000293889 APELAP0DMC3 54 aa14.01□□□□□ -0.17
CCDC78-201ENST00000293889 IAPPP10997 89 aa14.01□□□□□ -0.17
CCDC78-201ENST00000293889 VDAC2P45880 294 aaPredicted RBP14.01□□□□□ -0.17
CCDC78-201ENST00000293889 FHITP49789 147 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms