RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 HIGD1AQ9Y241 93 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 CSRP1P21291 193 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 TWIST1Q15672 202 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SAPCD1Q5SSQ6 148 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 GOLT1AQ6ZVE7 132 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SPACA3Q8IXA5 215 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SFRP2Q96HF1 295 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 GGACTQ9BVM4 153 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IL19Q9UHD0 177 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FOXA2Q9Y261 457 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 HYPMO75409 117 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 IGHV1-46P01743 117 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 MGPP08493 103 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 LRRC75BQ2VPJ9 315 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 SPRNQ5BIV9 151 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 DNM1P46Q6ZS02 220 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 WDR86Q86TI4 376 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 OR9G1Q8NH87 305 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 SFXN3Q9BWM7 321 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 WNT10AQ9GZT5 417 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 JPT1Q9UK76 154 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 TMEM56-RWDD3S4R434 201 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 KBTBD11-OT1A0A1B0GTJ5 212 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 GCHFRP30047 84 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 LYPD2Q6UXB3 125 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 ST6GALNAC6Q969X2 333 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 C1orf147Q96MC9 270 aaPredicted RBP3.97□□□□□ -1.77
UBR1-201ENST00000290650 ATG101Q9BSB4 218 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 SSBP4Q9BWG4 385 aaPredicted RBP3.97□□□□□ -1.77
UBR1-201ENST00000290650 A0A0G2JNJ9 132 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 NAPSAO96009 420 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 ZNF883P0CG24 379 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 CEACAM3P40198 252 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 PMCHL1Q16048 86 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 MDS2Q8NDY4 140 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 OR4C13Q8NGP0 309 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 DNAJC4Q9NNZ3 241 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 Q9UFV3 132 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.97□□□□□ -1.77
UBR1-201ENST00000290650 SNAI2O43623 268 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 HOXB1P14653 301 aaPredicted RBP3.97□□□□□ -1.77
UBR1-201ENST00000290650 SRIP30626 198 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 TMEM177Q53S58 311 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 KLF17Q5JT82 389 aaPredicted RBP3.97□□□□□ -1.77
UBR1-201ENST00000290650 CBLN4Q9NTU7 201 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 MUC22E2RYF6 1773 aaPredicted RBP3.97□□□□□ -1.77
UBR1-201ENST00000290650 IL4P05112 153 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 CD33P20138 364 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 C19orf35Q6ZS72 473 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 ASCL5Q7RTU5 278 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 GCSAMQ8N6F7 178 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 OR1P1Q8NH06 330 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 FAM57AQ8TBR7 257 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 TRANK1O15050 2925 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 SORL1Q92673 2214 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 LRP4O75096 1905 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 LOC105371242A0A075B767 164 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 DLL1O00548 723 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 CD5P06127 495 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 PF4V1P10720 104 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 CEACAM1P13688 526 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 SRD5A1P18405 259 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 ZNF474Q6S9Z5 364 aaPredicted RBP3.97□□□□□ -1.77
UBR1-201ENST00000290650 COQ2Q96H96 371 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 KLK15Q9H2R5 256 aa3.97□□□□□ -1.77
UBR1-201ENST00000290650 C17orf100A8MU93 164 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 B4DEV8 164 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 IGKV1-16P04430 117 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 SRSF4Q08170 494 aaKnown RBP3.96□□□□□ -1.77
UBR1-201ENST00000290650 Q6P435 159 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 UNQ5815/PRO19632Q6UWF5 114 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 GBGT1Q8N5D6 347 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 SLC25A33Q9BSK2 321 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 PLSCR2Q9NRY7 297 aa3.96□□□□□ -1.77
UBR1-201ENST00000290650 C5orf52A6NGY3 159 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 OR2T8A6NH00 312 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 KBTBD11O94819 623 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 GZMBP10144 247 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 PITPNC1Q9UKF7 332 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 IGKV1D-17A0A075B6S4 117 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 DIRC3C9JPN6 131 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 DUTP33316 252 aaKnown RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 UQCRFS1P47985 274 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 ZNF841Q6ZN19 808 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 SRSF12Q8WXF0 261 aaKnown RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 HAX1O00165 279 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 CDX1P47902 265 aaPredicted RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 GLMPQ8WWB7 406 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 SPTBN4Q9H254 2564 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 A0A1B0GUS0 222 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 A0A1W2PNU3 283 aaPredicted RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 IGHV3-11P01762 117 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 TMEM183BQ1AE95 376 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 DUX5Q96PT3 197 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 ZNF430Q9H8G1 570 aaPredicted RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 KLF2Q9Y5W3 355 aaPredicted RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 ADAMTS20P59510 1910 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 SMAD7O15105 426 aaKnown RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 TCF21O43680 179 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 RPL23P62829 140 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms