RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 SHPKQ9UHJ6 478 aa19.12■□□□□ 0.65
PDF-201ENST00000288022 INS-IGF2F8WCM5 200 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 NXPH3O95157 252 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 MT-CO2P00403 227 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 SULT1A3P0DMM9 295 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 SULT1A4P0DMN0 295 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 SUB1P53999 127 aaKnown RBP eCLIP19.11■□□□□ 0.65
PDF-201ENST00000288022 CNPY1Q3B7I2 92 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 OR52E5Q8NH55 327 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 DYNLRB2Q8TF09 96 aa19.11■□□□□ 0.65
PDF-201ENST00000288022 PIGBOS1A0A0B4J2F0 54 aa19.1■□□□□ 0.65
PDF-201ENST00000288022 A6NHS1 94 aa19.1■□□□□ 0.65
PDF-201ENST00000288022 C2orf70A6NJV1 201 aa19.1■□□□□ 0.65
PDF-201ENST00000288022 AARDQ4LEZ3 155 aa19.1■□□□□ 0.65
PDF-201ENST00000288022 ATP6V0BQ99437 205 aa19.1■□□□□ 0.65
PDF-201ENST00000288022 LSM4Q9Y4Z0 139 aaKnown RBP19.1■□□□□ 0.65
PDF-201ENST00000288022 CEBPZOSA8MTT3 80 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 I3L2K1 104 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 NDUFB6O95139 128 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 IGHV3-48P01763 117 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 FOLR2P14207 255 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 EDN2P20800 178 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 MFAP4P55083 255 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 PPP1R1AQ13522 171 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 LCN12Q6JVE5 192 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 SPSB3Q6PJ21 355 aa19.09■□□□□ 0.65
PDF-201ENST00000288022 C7orf50Q9BRJ6 194 aaKnown RBP19.09■□□□□ 0.65
PDF-201ENST00000288022 HEYLQ9NQ87 328 aaPredicted RBP19.09■□□□□ 0.65
PDF-201ENST00000288022 GAR1Q9NY12 217 aaKnown RBP19.09■□□□□ 0.65
PDF-201ENST00000288022 RNASE2P10153 161 aaKnown RBP19.08■□□□□ 0.64
PDF-201ENST00000288022 CD69Q07108 199 aa19.08■□□□□ 0.64
PDF-201ENST00000288022 NMSQ5H8A3 153 aa19.08■□□□□ 0.64
PDF-201ENST00000288022 UNQ9165/PRO28630Q6UXU0 137 aa19.08■□□□□ 0.64
PDF-201ENST00000288022 ADAMTSL5Q6ZMM2 481 aa19.08■□□□□ 0.64
PDF-201ENST00000288022 CHRDL1Q9BU40 450 aa19.08■□□□□ 0.64
PDF-201ENST00000288022 PALMDQ9NP74 551 aa19.08■□□□□ 0.64
PDF-201ENST00000288022 A8MWP6 167 aa19.07■□□□□ 0.64
PDF-201ENST00000288022 F8W735 103 aaPredicted RBP19.07■□□□□ 0.64
PDF-201ENST00000288022 SFT2D2O95562 160 aa19.07■□□□□ 0.64
PDF-201ENST00000288022 SMCO1Q147U7 214 aa19.07■□□□□ 0.64
PDF-201ENST00000288022 ANKRD55Q3KP44 614 aa19.07■□□□□ 0.64
PDF-201ENST00000288022 CACNG8Q8WXS5 425 aa19.07■□□□□ 0.64
PDF-201ENST00000288022 CACFD1Q9UGQ2 172 aa19.07■□□□□ 0.64
PDF-201ENST00000288022 SMAD5-AS1Q9Y6J3 95 aa19.07■□□□□ 0.64
PDF-201ENST00000288022 DUXBA0A1W2PPF3 345 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 TMEM213A2RRL7 107 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 CORTO00230 105 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 NUPL2O15504 423 aaKnown RBP19.06■□□□□ 0.64
PDF-201ENST00000288022 CBLN1P23435 193 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 TM4SF20Q53R12 229 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 OR2K2Q8NGT1 345 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 OR1S1Q8NH92 325 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 TXN2Q99757 166 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 ZNF436Q9C0F3 470 aaPredicted RBP19.06■□□□□ 0.64
PDF-201ENST00000288022 FLVCR2Q9UPI3 526 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 UFC1Q9Y3C8 167 aa19.06■□□□□ 0.64
PDF-201ENST00000288022 TGP01266 2768 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 IZUMO1RA6ND01 250 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 GNG7O60262 68 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 ADMP35318 185 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 HTR2BP41595 481 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 UBE2MP61081 183 aaKnown RBP19.05■□□□□ 0.64
PDF-201ENST00000288022 CD300EQ496F6 205 aaPredicted RBP19.05■□□□□ 0.64
PDF-201ENST00000288022 LINC00299Q6ZSB3 139 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 B9D2Q9BPU9 175 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 HIPK2Q9H2X6 1198 aa19.05■□□□□ 0.64
PDF-201ENST00000288022 A0A1B0GU03 582 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 CTSGP08311 255 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 BTCP35070 178 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 LRTM2Q8N967 370 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 DUSP18Q8NEJ0 188 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 S100ZQ8WXG8 99 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 TMEM190Q8WZ59 177 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 C20orf24Q9BUV8 137 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 CCDC32Q9BV29 185 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 TECRQ9NZ01 308 aaKnown RBP19.04■□□□□ 0.64
PDF-201ENST00000288022 SELENOKQ9Y6D0 94 aa19.04■□□□□ 0.64
PDF-201ENST00000288022 SORL1Q92673 2214 aa19.03■□□□□ 0.64
PDF-201ENST00000288022 NDUFA4O00483 81 aa19.03■□□□□ 0.64
PDF-201ENST00000288022 FCGR2BP31994 310 aaPredicted RBP19.03■□□□□ 0.64
PDF-201ENST00000288022 OPRK1P41145 380 aa19.03■□□□□ 0.64
PDF-201ENST00000288022 NPBWR1P48145 328 aa19.03■□□□□ 0.64
PDF-201ENST00000288022 RELQ04864 619 aaPredicted RBP19.03■□□□□ 0.64
PDF-201ENST00000288022 TNFRSF9Q07011 255 aa19.03■□□□□ 0.64
PDF-201ENST00000288022 DEFB114Q30KQ6 69 aa19.03■□□□□ 0.64
PDF-201ENST00000288022 UXS1Q8NBZ7 420 aa19.03■□□□□ 0.64
PDF-201ENST00000288022 PLA2G10O15496 165 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 LYRM1O43325 122 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 ELLP55199 621 aaPredicted RBP19.02■□□□□ 0.64
PDF-201ENST00000288022 BSXQ3C1V8 233 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 PVRIGQ6DKI7 326 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 GTSCR1Q86UQ5 136 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 SLC24A4Q8NFF2 622 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 MARC2Q969Z3 335 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 PTTG2Q9NZH5 202 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 HSPB7Q9UBY9 170 aa19.02■□□□□ 0.64
PDF-201ENST00000288022 IGHV3OR16-8A0A075B7F1 116 aa19.01■□□□□ 0.63
PDF-201ENST00000288022 C9orf170A2RU37 121 aa19.01■□□□□ 0.63
PDF-201ENST00000288022 HOXB5P09067 269 aa19.01■□□□□ 0.63
PDF-201ENST00000288022 GUCA2BQ16661 112 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms