RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TMEM108Q6UXF1 575 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 GFRALQ6UXV0 394 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 ZNF414Q96IQ9 312 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 NABP2Q9BQ15 211 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM160Q9NX00 188 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 JKAMPQ9P055 326 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 MKRN2OSH3BPM6 223 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 COX5BP10606 129 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 LINC00470Q9BZP3 86 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 PLSCR2Q9NRY7 297 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 TRBV24-1A0A075B6N3 115 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 MUC21A0A0G2JKD1 596 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 MUC21A0A140T8X8 626 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 LINC00205P59089 165 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 LRRC75BQ2VPJ9 315 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 MUC21Q5SSG8 566 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 OR4D5Q8NGN0 318 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
SLC6A1-201ENST00000287766 NTN3O00634 580 aaPredicted RBP10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 ZNF324O75467 553 aaPredicted RBP10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 COX6CP09669 75 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 GZMBP10144 247 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 GPR183P32249 361 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 GFRA1P56159 465 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 SRSF4Q08170 494 aaKnown RBP10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 IGHV3-72A0A0B4J1Y9 119 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A26D6RGX4 464 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 CFPP27918 469 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 RND2P52198 227 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 OR13A1Q8NGR1 328 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 SIGMAR1Q99720 223 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 NPCDR1Q9BY65 106 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 SP9P0CG40 484 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 RNASE7Q9H1E1 156 aaKnown RBP10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 WNK1Q9H4A3 2382 aa10.53□□□□□ -0.72
SLC6A1-201ENST00000287766 HBBP68871 147 aa10.52□□□□□ -0.72
SLC6A1-201ENST00000287766 ID3Q02535 119 aa10.52□□□□□ -0.72
SLC6A1-201ENST00000287766 C20orf204Q6ZNR8 217 aa10.52□□□□□ -0.72
SLC6A1-201ENST00000287766 C1QL4Q86Z23 238 aa10.52□□□□□ -0.72
SLC6A1-201ENST00000287766 STPG3Q8N7X2 389 aa10.52□□□□□ -0.72
SLC6A1-201ENST00000287766 PROK2Q9HC23 129 aa10.52□□□□□ -0.72
SLC6A1-201ENST00000287766 PRRC2CQ9Y520 2896 aaKnown RBP10.52□□□□□ -0.72
SLC6A1-201ENST00000287766 TRAV9-2A0A087WT02 112 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 IGHV2-70P01814 119 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 B3GALT5-AS1P59052 145 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 RBPJQ06330 500 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 LCN12Q6JVE5 192 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 A0A0G2JRQ6 117 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 GOSR1O95249 250 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 IGHV1-2P23083 117 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 CGB1A6NKQ9 187 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 CA7P43166 264 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 TTC9CQ8N5M4 171 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 LPAR2Q9HBW0 351 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 NHP2Q9NX24 153 aaKnown RBP10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 RNF7Q9UBF6 113 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 U3KQA8 63 aa10.52□□□□□ -0.73
SLC6A1-201ENST00000287766 MED13Q9UHV7 2174 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 APOMO95445 188 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 APOHP02749 345 aaPredicted RBP10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 NPSP0C0P6 89 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 CECR9P0C854 216 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 ZNF525Q8N782 197 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 GATAD1Q8WUU5 269 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 KLRB1Q12918 225 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 EAF1Q96JC9 268 aaPredicted RBP10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 SNHG12Q9BXW3 62 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 CRIM1Q9NZV1 1036 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 HIGD1AQ9Y241 93 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 GTF3C1Q12789 2109 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 A8MWP6 167 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 MGST3O14880 152 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
SLC6A1-201ENST00000287766 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 FTH1P19P0C7X4 201 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 HSPE1P61604 102 aaKnown RBP10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 MAP1LC3AQ9H492 121 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 UBTD1Q9HAC8 227 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 TNFRSF19Q9NS68 423 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 PPIAL4AQ9Y536 164 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 FOXC1Q12948 553 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 PRR31Q5SQ13 230 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 INSIG2Q9Y5U4 225 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 TDGF1P3P51864 188 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 SELENOTP62341 195 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 ADIPOQQ15848 244 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 GCSAMLQ5JQS6 135 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms