RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TRAV30A0A087WSZ9 112 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 MGST3O14880 152 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 HLA-DQA1P01909 254 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 LOXL3P58215 753 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 ERVK-16P61578 105 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 PRAMEF5Q5TYX0 476 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 PRAMEF6Q5VXH4 476 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 ETFRF1Q6IPR1 90 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 FAM53AQ6NSI3 398 aaPredicted RBP8.53□□□□□ -1.04
SKA1-201ENST00000285116 ZNF826PQ6ZT77 177 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 PPP1R35Q8TAP8 253 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 MS4A5Q9H3V2 200 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 NPVFQ9HCQ7 196 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 HCFC1P51610 2035 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 IGLC7A0M8Q6 106 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 SRRM5B3KS81 715 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 NKX2-8O15522 239 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 CGB3P0DN86 165 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 CGB7P0DN87 165 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 PRDX2P32119 198 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 Q6ZVH6 145 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 TSKUQ8WUA8 353 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 IFI27L2Q9H2X8 130 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 USF3Q68DE3 2245 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 C15orf61A6NNL5 157 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 AMY1AP04745 511 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 WT1P19544 449 aaPredicted RBP8.53□□□□□ -1.04
SKA1-201ENST00000285116 SRIP30626 198 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 RPS20P60866 119 aaKnown RBP8.53□□□□□ -1.04
SKA1-201ENST00000285116 TMEM30BQ3MIR4 351 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 KIAA1644Q3SXP7 199 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 ZGRF1Q86YA3 2104 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 OR4P4Q8NGL7 312 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 CORO2AQ92828 525 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 LOXL4Q96JB6 756 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 TMEM14BQ9NUH8 114 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 MRPL27Q9P0M9 148 aaKnown RBP8.53□□□□□ -1.04
SKA1-201ENST00000285116 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
SKA1-201ENST00000285116 NOTCH2Q04721 2471 aa8.52□□□□□ -1.04
SKA1-201ENST00000285116 TRAV9-2A0A087WT02 112 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 BMPR1BO00238 502 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 PRR20EP86478 221 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 PRR20CP86479 221 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 PRR20DP86480 221 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 PRR20BP86481 221 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 PRR20AP86496 221 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 MIC13Q5XKP0 118 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 TET2Q6N021 2002 aaPredicted RBP8.52□□□□□ -1.05
SKA1-201ENST00000285116 GCSAMQ8N6F7 178 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 ZNF439Q8NDP4 499 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 OR4S2Q8NH73 311 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 OSTCQ9NRP0 149 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 TCF19Q9Y242 345 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 DOCK11Q5JSL3 2073 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 TIMM8AO60220 97 aaPredicted RBP8.52□□□□□ -1.05
SKA1-201ENST00000285116 FCGR3BO75015 233 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 LYZL6O75951 148 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 GNG4P50150 75 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 C3orf36Q3SXR2 165 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 MUC15Q8N387 334 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 NEUROG1Q92886 237 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 ADTRPQ96IZ2 230 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 CLEC7AQ9BXN2 247 aa8.52□□□□□ -1.05
SKA1-201ENST00000285116 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
SKA1-201ENST00000285116 IGKV1D-17A0A075B6S4 117 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 PRR33A8MZF0 331 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 SPINK4O60575 86 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 HOXC12P31275 282 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 SELENOVP59797 346 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 EFNB3Q15768 340 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 TEPPQ6URK8 271 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 GCNT2Q8N0V5 402 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 ATOH7Q8N100 152 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 OR4F17Q8NGA8 305 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 S1PR3Q99500 378 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 C19orf24Q9BVV8 132 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 LINC00574Q9H8X3 128 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 PLSCR4Q9NRQ2 329 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 TMEM140Q9NV12 185 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 CECR9P0C854 216 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 NTF3P20783 257 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 KIR2DL2P43627 348 aaPredicted RBP8.51□□□□□ -1.05
SKA1-201ENST00000285116 RAB31Q13636 194 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 VAMP3Q15836 100 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 LRRC29Q8WV35 223 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 ZNF257Q9Y2Q1 563 aa8.51□□□□□ -1.05
SKA1-201ENST00000285116 IGHV3-43A0A0B4J1X8 118 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 HELTA6NFD8 242 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 M0R1X1 148 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 APCSP02743 223 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 IGHV3-43DP0DP04 118 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 RHOGP84095 191 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 RTL8BQ17RB0 113 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
SKA1-201ENST00000285116 IGFL2Q6UWQ7 119 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms