RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 FOXA3P55318 350 aaPredicted RBP11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 VAMP3Q15836 100 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 OR4A47Q6IF82 309 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 ZNF474Q6S9Z5 364 aaPredicted RBP11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 FAM90A1Q86YD7 464 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 NEUROG1Q92886 237 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 FLYWCH2Q96CP2 140 aaKnown RBP11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 SEPSECSQ9HD40 501 aaKnown RBP11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 MOSP00540 346 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 RAB7AP51149 207 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 CENPWQ5EE01 88 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 PPIAL4AQ9Y536 164 aa11.36□□□□□ -0.59
LPCAT1-201ENST00000283415 IL6RP08887 468 aaPredicted RBP11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 GPR6P46095 362 aaPredicted RBP11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 PRR30Q53SZ7 412 aaPredicted RBP11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 SLC45A2Q9UMX9 530 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 TRBV24-1A0A075B6N3 115 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 PPIAL4EA0A075B759 164 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 PPIAL4DF5H284 164 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 PPIAL4FP0DN26 164 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 GCHFRP30047 84 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 DUTP33316 252 aaKnown RBP11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 ZBTB34Q8NCN2 500 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 SERTM2A0A1B0GWG4 89 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 PMS2P5A8MQ11 134 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 GCGP01275 180 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 CD40P25942 277 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 LYZP61626 148 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 AARDQ4LEZ3 155 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 HSBP1L1C9JCN9 74 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 DMRTC2Q8IXT2 367 aaPredicted RBP11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 NPIPB3Q92617 1050 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 RNF24Q9Y225 148 aa11.35□□□□□ -0.59
LPCAT1-201ENST00000283415 TMSB15BA0A087X1C1 80 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 GLRXP35754 106 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 UTF1Q5T230 341 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 OR2T6Q8NHC8 308 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 ATMQ13315 3056 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 TIMP3P35625 211 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 LINC01551Q86U37 167 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 RPEQ96AT9 228 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 NABP2Q9BQ15 211 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 TMEM242Q9NWH2 141 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 C2CD3Q4AC94 2353 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 M0R2Z0 102 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 CHEK1O14757 476 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 MMP23AO75900 390 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 SRP14P37108 136 aaKnown RBP11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 TAS2R60P59551 318 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 HSPE1P61604 102 aaKnown RBP11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 OR9G1Q8NH87 305 aa11.34□□□□□ -0.59
LPCAT1-201ENST00000283415 FAM90A26D6RGX4 464 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 LINC00869P0C866 280 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 LGALS4P56470 323 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 TMEM170AQ8WVE7 144 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 NOL4LQ96MY1 436 aaPredicted RBP11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 AP1S3Q96PC3 154 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 MRPL20Q9BYC9 149 aaKnown RBP11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 HSPB7Q9UBY9 170 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 RND2P52198 227 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 VWC2Q2TAL6 325 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 IBA57Q5T440 356 aaKnown RBP11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 USP9XQ93008 2570 aaPredicted RBP11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 CENPEQ02224 2701 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 ZNF134P52741 427 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 ARF6P62330 175 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 TEX38Q6PEX7 206 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 ZNF714Q96N38 554 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 GAL3ST2Q9H3Q3 398 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 INSIG2Q9Y5U4 225 aa11.33□□□□□ -0.6
LPCAT1-201ENST00000283415 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 CT45A1Q5HYN5 189 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 Q8N7P7 452 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 CT45A3Q8NHU0 189 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 CORO2AQ92828 525 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 ABCA2Q9BZC7 2435 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 TRAV5A0A0B4J249 113 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 TIMM23BQ5SRD1 257 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 GNB4Q9HAV0 340 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 SORL1Q92673 2214 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 RPLP1P05386 114 aaKnown RBP11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 PTTG1IPP53801 180 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
LPCAT1-201ENST00000283415 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms