RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CT45A1Q5HYN5 189 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 CT45A3Q8NHU0 189 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 ORAOV1Q8WV07 137 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 TMEM14BQ9NUH8 114 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 ABI3Q9P2A4 366 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 OR51B2Q9Y5P1 312 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 COX11Q9Y6N1 276 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 DSCAMO60469 2012 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 ZNF891A8MT65 544 aaPredicted RBP15.25■□□□□ 0.03
SSC4D-201ENST00000275560 CORTO00230 105 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 PPOXP50336 477 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 LHFPL4Q7Z7J7 247 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 OR4S2Q8NH73 311 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 JPT1Q9UK76 154 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 IZUMO1RA6ND01 250 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 FAM181BA6NEQ2 426 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 PYYP10082 97 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 TDHQ8IZJ6 230 aa15.25■□□□□ 0.03
SSC4D-201ENST00000275560 TRGV5A0A0B4J1U4 118 aa15.24■□□□□ 0.03
SSC4D-201ENST00000275560 CD46P15529 392 aa15.24■□□□□ 0.03
SSC4D-201ENST00000275560 KLHDC1Q8N7A1 406 aa15.24■□□□□ 0.03
SSC4D-201ENST00000275560 OR10W1Q8NGF6 305 aa15.24■□□□□ 0.03
SSC4D-201ENST00000275560 J3QW42 95 aa15.24■□□□□ 0.03
SSC4D-201ENST00000275560 SSBP2P81877 361 aaPredicted RBP15.24■□□□□ 0.03
SSC4D-201ENST00000275560 RPL19P84098 196 aaKnown RBP15.24■□□□□ 0.03
SSC4D-201ENST00000275560 UBE2V1Q13404 147 aa15.24■□□□□ 0.03
SSC4D-201ENST00000275560 RNF151Q2KHN1 245 aa15.24■□□□□ 0.03
SSC4D-201ENST00000275560 SLC25A10Q9UBX3 287 aaPredicted RBP15.24■□□□□ 0.03
SSC4D-201ENST00000275560 J3QR06 171 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 IGKV1-16P04430 117 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 CECR9P0C854 216 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 SELENOVP59797 346 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 C19orf35Q6ZS72 473 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 NUP35Q8NFH5 326 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 FOXA2Q9Y261 457 aaPredicted RBP15.23■□□□□ 0.03
SSC4D-201ENST00000275560 INTS1Q8N201 2190 aaKnown RBP15.23■□□□□ 0.03
SSC4D-201ENST00000275560 MMP23AO75900 390 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 OR4F17Q8NGA8 305 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 TNFRSF19Q9NS68 423 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 BET1LQ9NYM9 111 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 CALYQ9NYX4 217 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 PLXNB1O43157 2135 aa15.23■□□□□ 0.03
SSC4D-201ENST00000275560 IGHV2-26A0A0B4J1V2 119 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 VWA1Q6PCB0 445 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 TRAT1Q6PIZ9 186 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 SNRNP40Q96DI7 357 aaKnown RBP15.22■□□□□ 0.03
SSC4D-201ENST00000275560 SRRM4A7MD48 611 aaKnown RBP15.22■□□□□ 0.03
SSC4D-201ENST00000275560 VWC2LB2RUY7 222 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 UBE2L3P68036 154 aaKnown RBP15.22■□□□□ 0.03
SSC4D-201ENST00000275560 MSMPQ1L6U9 139 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 HES3Q5TGS1 186 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 LINC00173Q6ZV60 143 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 ZNF738Q8NE65 137 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 OR2T6Q8NHC8 308 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 C22orf15Q8WYQ4 148 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 ALKBH7Q9BT30 221 aaPredicted RBP15.22■□□□□ 0.03
SSC4D-201ENST00000275560 RNF24Q9Y225 148 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 DYSFO75923 2080 aa15.22■□□□□ 0.03
SSC4D-201ENST00000275560 KLF3P57682 345 aaPredicted RBP15.21■□□□□ 0.03
SSC4D-201ENST00000275560 TRIB1Q96RU8 372 aa15.21■□□□□ 0.03
SSC4D-201ENST00000275560 MCRIP2Q9BUT9 160 aaKnown RBP15.21■□□□□ 0.03
SSC4D-201ENST00000275560 KALRNO60229 2985 aa15.21■□□□□ 0.03
SSC4D-201ENST00000275560 TRAV9-2A0A087WT02 112 aa15.21■□□□□ 0.03
SSC4D-201ENST00000275560 KLRC4-KLRK1H3BQV0 150 aa15.21■□□□□ 0.03
SSC4D-201ENST00000275560 PLAUP00749 431 aa15.21■□□□□ 0.03
SSC4D-201ENST00000275560 GNG5P63218 68 aa15.21■□□□□ 0.03
SSC4D-201ENST00000275560 SLC25A33Q9BSK2 321 aa15.21■□□□□ 0.03
SSC4D-201ENST00000275560 TNRC18O15417 2968 aaPredicted RBP15.21■□□□□ 0.02
SSC4D-201ENST00000275560 FOXA3P55318 350 aaPredicted RBP15.21■□□□□ 0.02
SSC4D-201ENST00000275560 GCSAMQ8N6F7 178 aa15.21■□□□□ 0.02
SSC4D-201ENST00000275560 MDS2Q8NDY4 140 aa15.21■□□□□ 0.02
SSC4D-201ENST00000275560 NUDT10Q8NFP7 164 aa15.21■□□□□ 0.02
SSC4D-201ENST00000275560 NUDT11Q96G61 164 aa15.21■□□□□ 0.02
SSC4D-201ENST00000275560 OR8B2Q96RD0 313 aa15.21■□□□□ 0.02
SSC4D-201ENST00000275560 SLC25A2Q9BXI2 301 aa15.21■□□□□ 0.02
SSC4D-201ENST00000275560 KLF13Q9Y2Y9 288 aaPredicted RBP15.21■□□□□ 0.02
SSC4D-201ENST00000275560 DMXL2Q8TDJ6 3036 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 COL27A1Q8IZC6 1860 aaPredicted RBP15.2■□□□□ 0.02
SSC4D-201ENST00000275560 C2orf70A6NJV1 201 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 INO80CQ6PI98 192 aaPredicted RBP15.2■□□□□ 0.02
SSC4D-201ENST00000275560 RND1Q92730 232 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 LOXL4Q96JB6 756 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 MRPS16Q9Y3D3 137 aaKnown RBP15.2■□□□□ 0.02
SSC4D-201ENST00000275560 RP1L1Q8IWN7 2480 aaPredicted RBP15.2■□□□□ 0.02
SSC4D-201ENST00000275560 IGHV2OR16-5A0A0B4J2B6 119 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 TOMM40O96008 361 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 UBE2G1P62253 170 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 C17orf58Q2M2W7 97 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 FBLN7Q53RD9 439 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 URB1-AS1Q96HZ7 61 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 FAM167A-AS1Q96KT0 104 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 SPRY4Q9C004 299 aa15.2■□□□□ 0.02
SSC4D-201ENST00000275560 IGLC7A0M8Q6 106 aa15.19■□□□□ 0.02
SSC4D-201ENST00000275560 MGST3O14880 152 aa15.19■□□□□ 0.02
SSC4D-201ENST00000275560 REG1AP05451 166 aa15.19■□□□□ 0.02
SSC4D-201ENST00000275560 C8orf88P0DMB2 117 aa15.19■□□□□ 0.02
SSC4D-201ENST00000275560 ETFRF1Q6IPR1 90 aa15.19■□□□□ 0.02
SSC4D-201ENST00000275560 OR8B3Q8NGG8 313 aa15.19■□□□□ 0.02
SSC4D-201ENST00000275560 OR2D3Q8NGH3 330 aa15.19■□□□□ 0.02
SSC4D-201ENST00000275560 HIGD1CA8MV81 97 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms