RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZC2HC1AQ96GY0 325 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 NAV3Q8IVL0 2385 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 CORTO00230 105 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 S100A7P31151 101 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 RND1Q92730 232 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 PLCE1Q9P212 2302 aa10.59□□□□□ -0.71
COL8A1-202ENST00000273342 TECTAO75443 2155 aa10.58□□□□□ -0.71
COL8A1-202ENST00000273342 AREGP15514 252 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 RBX1P62877 108 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 OR10J3Q5JRS4 329 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 GDF5OSQ5U4N7 250 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 OR4C5Q8NGB2 326 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 OR2D3Q8NGH3 330 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 BET1LQ9NYM9 111 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 LNP1A1A4G5 178 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 RPL19P84098 196 aaKnown RBP10.58□□□□□ -0.72
COL8A1-202ENST00000273342 MRPL52Q86TS9 123 aaKnown RBP10.58□□□□□ -0.72
COL8A1-202ENST00000273342 SPACA3Q8IXA5 215 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 KLHDC1Q8N7A1 406 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 CXXC4Q9H2H0 198 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 IGKV1D-17A0A075B6S4 117 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 TRAV9-1A0A075B6T8 112 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 H3BTX0 84 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 J3QR06 171 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 MT-ND6P03923 174 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 ADH4P08319 380 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 DUSP3P51452 185 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-202ENST00000273342 OR2T6Q8NHC8 308 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 C22orf15Q8WYQ4 148 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 OR8B2Q96RD0 313 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 ALKBH7Q9BT30 221 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-202ENST00000273342 OR51B2Q9Y5P1 312 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
COL8A1-202ENST00000273342 KALRNO60229 2985 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 SAA2-SAA4A0A096LPE2 208 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 TRBV9A0A0B4J1U6 114 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 C15orf61A6NNL5 157 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 HLA-DQA1P01909 254 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 SAA2P0DJI9 122 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-202ENST00000273342 HSPE1P61604 102 aaKnown RBP10.57□□□□□ -0.72
COL8A1-202ENST00000273342 GNG5P63218 68 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 UBE2L3P68036 154 aaKnown RBP10.57□□□□□ -0.72
COL8A1-202ENST00000273342 PRR20EP86478 221 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 PRR20CP86479 221 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 PRR20DP86480 221 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 PRR20BP86481 221 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 PRR20AP86496 221 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 ZNF738Q8NE65 137 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 TRIB1Q96RU8 372 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 PMCHL2Q9BQD1 86 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 ABI3Q9P2A4 366 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 COLQQ9Y215 455 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-202ENST00000273342 IGKV1-16P04430 117 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 SSBP2P81877 361 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-202ENST00000273342 GABRA6Q16445 453 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 LOXL4Q96JB6 756 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 COX11Q9Y6N1 276 aa10.57□□□□□ -0.72
COL8A1-202ENST00000273342 DYSFO75923 2080 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 TRGV5A0A0B4J1U4 118 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 hDV102S1A0JD36 115 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 FAM181BA6NEQ2 426 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 CBY3A6NI87 242 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 NKX6-3A6NJ46 265 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 C9orf172C9J069 976 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 HOXC12P31275 282 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 TMPRSS3P57727 454 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 UBE2V1Q13404 147 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 MPV17L2Q567V2 206 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 CT45A1Q5HYN5 189 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 CT45A3Q8NHU0 189 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 SPTA1P02549 2419 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 LOC105371242A0A075B767 164 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 ZNF137PP52743 207 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 WDR31Q8NA23 367 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 OR4S2Q8NH73 311 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 NEUROG1Q92886 237 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 IDI2-AS1Q9NZ38 188 aa10.56□□□□□ -0.72
COL8A1-202ENST00000273342 ZFHX2Q9C0A1 2572 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-202ENST00000273342 CA7P43166 264 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 ZNF138P52744 262 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 TCTAP57738 103 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 VWA1Q6PCB0 445 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 TCF24Q7RTU0 167 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 BLNKQ8WV28 456 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 SNRNP40Q96DI7 357 aaKnown RBP10.55□□□□□ -0.72
COL8A1-202ENST00000273342 WASHC3Q9Y3C0 194 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 ISLRO14498 428 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 SNAI2O43623 268 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 LOXL3P58215 753 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 FBLN7Q53RD9 439 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 TANC2Q9HCD6 1990 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 ACACAQ13085 2346 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms