RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 PVRIGQ6DKI7 326 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 ST6GALNAC6Q969X2 333 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMG9-201ENST00000270066 NEU1Q99519 415 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 TMEM8BA6NDV4 472 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 LYNX1G3V0Z9 82 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 LYNX1P0DP58 116 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 GNLYP22749 145 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
SMG9-201ENST00000270066 PAX1P15863 534 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 ZCCHC24Q8N2G6 241 aaKnown RBP11.06□□□□□ -0.64
SMG9-201ENST00000270066 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 MBD3L4A6NDZ8 208 aaPredicted RBP11.06□□□□□ -0.64
SMG9-201ENST00000270066 MBD3L3A6NE82 208 aaPredicted RBP11.06□□□□□ -0.64
SMG9-201ENST00000270066 DPRXA6NFQ7 191 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 MBD3L5A6NJ08 208 aaPredicted RBP11.06□□□□□ -0.64
SMG9-201ENST00000270066 PEX7O00628 323 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 PPP1R17O96001 155 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 HBBP68871 147 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 Q6ZS92 163 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 MBD3L2Q8NHZ7 208 aaPredicted RBP11.06□□□□□ -0.64
SMG9-201ENST00000270066 NDUFAF3Q9BU61 184 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 H7C2G1 150 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 GAS1P54826 345 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 TMEM144Q7Z5S9 345 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 ZNF319Q9P2F9 582 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 SRRM5B3KS81 715 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 CGAP01215 116 aa11.06□□□□□ -0.64
SMG9-201ENST00000270066 UBE2CO00762 179 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 IGHG3P01860 377 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 WNT2P09544 360 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 PRSS8Q16651 343 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 DUX3Q96PT4 197 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 SPOCK3Q9BQ16 436 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 TMEM70Q9BUB7 260 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 A0A0G2JNJ9 132 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 PRR32B1ATL7 298 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 IGHV3-11P01762 117 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 PLAURQ03405 335 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 Q9UFV3 132 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 CACNA1IQ9P0X4 2223 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 IGKV1D-13A0A0B4J2D9 117 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 A0A1W2PRX2 142 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 IGKV1-13P0DP09 117 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 LGALS3P17931 250 aaKnown RBP11.05□□□□□ -0.64
SMG9-201ENST00000270066 APC2O95996 2303 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 MGAMO43451 1857 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 PLXNA3P51805 1871 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 ZDBF2Q9HCK1 2354 aa11.05□□□□□ -0.64
SMG9-201ENST00000270066 RLFQ13129 1914 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 TRBV20OR9-2A0A075B6H5 130 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 SNAI2O43623 268 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 ZNF324BQ6AW86 544 aaPredicted RBP11.04□□□□□ -0.64
SMG9-201ENST00000270066 ZNF525Q8N782 197 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 FNDC1Q4ZHG4 1894 aaPredicted RBP11.04□□□□□ -0.64
SMG9-201ENST00000270066 C9JCJ5 164 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 CIRBPQ14011 172 aaKnown RBP11.04□□□□□ -0.64
SMG9-201ENST00000270066 SPTA1P02549 2419 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 MPZP25189 248 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 FOXG1P55316 489 aaPredicted RBP11.04□□□□□ -0.64
SMG9-201ENST00000270066 LY6G6FQ5SQ64 297 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 TBL2Q9Y4P3 447 aaKnown RBP11.04□□□□□ -0.64
SMG9-201ENST00000270066 TRAV40A0A0B4J280 105 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 TIMM23O14925 209 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 ALKBH7Q9BT30 221 aaPredicted RBP11.04□□□□□ -0.64
SMG9-201ENST00000270066 OTORQ9NRC9 128 aa11.04□□□□□ -0.64
SMG9-201ENST00000270066 SLC17A3O00476 420 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 COX6CP09669 75 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 OR9G9P0C7N8 305 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 DUTP33316 252 aaKnown RBP11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
SMG9-201ENST00000270066 CIARTQ8N365 385 aaPredicted RBP11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 TMEM101Q96IK0 257 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 GEMIN7Q9H840 131 aaKnown RBP11.03□□□□□ -0.64
SMG9-201ENST00000270066 SDF2L1Q9HCN8 221 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 A6NNC1 897 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 PRCDQ00LT1 54 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 RNF126Q9BV68 326 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 A0A1B0GW15 77 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 LEPP41159 167 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 Q6AWC8 147 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 Q9H3A6 140 aa11.03□□□□□ -0.64
SMG9-201ENST00000270066 SOX21Q9Y651 276 aaPredicted RBP11.03□□□□□ -0.64
SMG9-201ENST00000270066 OOSP1A8MZH6 123 aa11.02□□□□□ -0.64
SMG9-201ENST00000270066 GFI1BQ5VTD9 330 aa11.02□□□□□ -0.64
SMG9-201ENST00000270066 MIR17HGQ75NE6 70 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms