RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TMEM189A5PLL7 270 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 NPSP0C0P6 89 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 CYYR1Q96J86 154 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 NAA38Q9BRA0 125 aaKnown RBP9.66□□□□□ -0.86
VPS33A-201ENST00000267199 SLC25A33Q9BSK2 321 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 CENPFP49454 3210 aa9.66□□□□□ -0.86
VPS33A-201ENST00000267199 C7orf71A4D174 169 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 IGHV1-2P23083 117 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 ACTL10Q5JWF8 245 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 CD3EP07766 207 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 KIR2DL2P43627 348 aaPredicted RBP9.65□□□□□ -0.86
VPS33A-201ENST00000267199 ZNF502Q8TBZ5 544 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 MYOZ3Q8TDC0 251 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 CRIM1Q9NZV1 1036 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 THYN1Q9P016 225 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 POLR3KQ9Y2Y1 108 aaPredicted RBP9.65□□□□□ -0.86
VPS33A-201ENST00000267199 H3BUT2 72 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 LINC00305Q7Z4B0 112 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 GP6Q9HCN6 339 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 RALYQ9UKM9 306 aaKnown RBP9.65□□□□□ -0.86
VPS33A-201ENST00000267199 WDR83OSQ9Y284 106 aa9.65□□□□□ -0.86
VPS33A-201ENST00000267199 NCOA6Q14686 2063 aaPredicted RBP9.65□□□□□ -0.86
VPS33A-201ENST00000267199 TRAV9-2A0A087WT02 112 aa9.65□□□□□ -0.87
VPS33A-201ENST00000267199 TMEM105Q8N8V8 129 aa9.65□□□□□ -0.87
VPS33A-201ENST00000267199 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.87
VPS33A-201ENST00000267199 SMIM12Q96EX1 92 aa9.65□□□□□ -0.87
VPS33A-201ENST00000267199 LOXL4Q96JB6 756 aa9.65□□□□□ -0.87
VPS33A-201ENST00000267199 ZNF714Q96N38 554 aa9.65□□□□□ -0.87
VPS33A-201ENST00000267199 DIRC2Q96SL1 478 aa9.65□□□□□ -0.87
VPS33A-201ENST00000267199 FNDC4Q9H6D8 234 aaPredicted RBP9.65□□□□□ -0.87
VPS33A-201ENST00000267199 A1L4Q6 167 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
VPS33A-201ENST00000267199 GNG5P63218 68 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 MBNL2Q5VZF2 373 aaKnown RBP9.64□□□□□ -0.87
VPS33A-201ENST00000267199 SPATA31B1PQ5VZV4 182 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 IFNL4K9M1U5 179 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 PEX7O00628 323 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 LINC00205P59089 165 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 C1orf185Q5T7R7 199 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 SFXN3Q9BWM7 321 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 MEGF9Q9H1U4 602 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 KLK15Q9H2R5 256 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 ELOVL5Q9NYP7 299 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 KIAA1671Q9BY89 1806 aa9.64□□□□□ -0.87
VPS33A-201ENST00000267199 IGKV3D-15A0A087WSY6 115 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 PFN1P07737 140 aaKnown RBP9.63□□□□□ -0.87
VPS33A-201ENST00000267199 RPL13AP40429 203 aaKnown RBP9.63□□□□□ -0.87
VPS33A-201ENST00000267199 RPL30P62888 115 aaKnown RBP9.63□□□□□ -0.87
VPS33A-201ENST00000267199 EFNB3Q15768 340 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 GRAMD2BQ96HH9 432 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 SCNM1Q9BWG6 230 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 IGHV3-35A0A0C4DH35 117 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 IZUMO1RA6ND01 250 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 NBEAP1P0C6P0 100 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 OR9G9P0C7N8 305 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 PYYP10082 97 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 IDI2-AS1Q9NZ38 188 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 PCNX2A6NKB5 2137 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 MGPP08493 103 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 Q0VFX4 171 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 ZNF146Q15072 292 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 SPANXN1Q5VSR9 72 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 AMMECR1LQ6DCA0 310 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 UNQ6494/PRO21346Q6UXR6 183 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 ZNF497Q6ZNH5 498 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 TMEM136Q6ZRR5 245 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 USF3Q68DE3 2245 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 TRAV8-6A0A0B4J262 113 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 H7C2G1 150 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 FCGR2BP31994 310 aaPredicted RBP9.63□□□□□ -0.87
VPS33A-201ENST00000267199 FOXL1Q12952 345 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 TMUB1Q9BVT8 246 aa9.63□□□□□ -0.87
VPS33A-201ENST00000267199 UTRNP46939 3433 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 IQCF6A8MYZ5 107 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 LINC00614P0C842 121 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 C3orf79P0CE67 100 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 ZNF883P0CG24 379 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 CDKN1AP38936 164 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 GFRA1P56159 465 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 SEPSECSQ9HD40 501 aaKnown RBP9.62□□□□□ -0.87
VPS33A-201ENST00000267199 SPCS1Q9Y6A9 102 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 TRAV9-1A0A075B6T8 112 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 IFI27L2Q9H2X8 130 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 CEP350Q5VT06 3117 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 COL4A3Q01955 1670 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 ETV2O00321 342 aaPredicted RBP9.62□□□□□ -0.87
VPS33A-201ENST00000267199 LILRA1O75019 489 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 B3GALT5-AS1P59052 145 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 FREM1Q5H8C1 2179 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 LYRM7Q5U5X0 104 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 ZNF414Q96IQ9 312 aa9.62□□□□□ -0.87
VPS33A-201ENST00000267199 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.62□□□□□ -0.874e-9■■■■■ 34.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms