RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.8□□□□□ -0.04
NOTCH3-201ENST00000263388 SDF2L1Q9HCN8 221 aa14.8□□□□□ -0.04
NOTCH3-201ENST00000263388 YAE1D1Q9NRH1 226 aa14.8□□□□□ -0.04
NOTCH3-201ENST00000263388 PGPEP1LA6NFU8 196 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 FOXL2P58012 376 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 KIAA1671Q9BY89 1806 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 APOMO95445 188 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 MOSP00540 346 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 C5orf30Q96GV9 206 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 WDYHV1Q96HA8 205 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 WNT10AQ9GZT5 417 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 IGHV3-48P01763 117 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 APOBEC3AP31941 199 aaPredicted RBP14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 PRSS53Q2L4Q9 553 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 DMRTA2Q96SC8 542 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 HIGD1CA8MV81 97 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 CIARTQ8N365 385 aaPredicted RBP14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 C14orf144Q96I85 54 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 SSBP3Q9BWW4 388 aaPredicted RBP14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 ZNF688P0C7X2 276 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 PAX1P15863 534 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 ZNRF1Q8ND25 227 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 C18orf15Q96N68 181 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 MGST2Q99735 147 aa14.79□□□□□ -0.04
NOTCH3-201ENST00000263388 TRAV8-4A0A0B4J246 113 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 A8MXK9 166 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 PCOLCEQ15113 449 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 FAM90A1Q86YD7 464 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 TRAV21A0A0B4J279 112 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 RPP21Q9H633 154 aaKnown RBP14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 CGAP01215 116 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 KLF4O43474 513 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 UCP1P25874 307 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 PLNP26678 52 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 IL6RP08887 468 aaPredicted RBP14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 SRSF6Q13247 344 aaKnown RBP14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 CHODLQ9H9P2 273 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 PNKDQ8N490 385 aa14.78□□□□□ -0.04
NOTCH3-201ENST00000263388 RPL39P5Q59GN2 51 aa14.77□□□□□ -0.04
NOTCH3-201ENST00000263388 Q5BKY6 102 aa14.77□□□□□ -0.04
NOTCH3-201ENST00000263388 CFHR5Q9BXR6 569 aa14.77□□□□□ -0.04
NOTCH3-201ENST00000263388 M0R381 172 aa14.77□□□□□ -0.04
NOTCH3-201ENST00000263388 NDUFA3O95167 84 aa14.77□□□□□ -0.04
NOTCH3-201ENST00000263388 APOHP02749 345 aaPredicted RBP14.77□□□□□ -0.04
NOTCH3-201ENST00000263388 CDCP2Q5VXM1 449 aa14.77□□□□□ -0.04
NOTCH3-201ENST00000263388 ZFAND6Q6FIF0 208 aa14.77□□□□□ -0.05
NOTCH3-201ENST00000263388 TRGV3P03979 118 aa14.77□□□□□ -0.05
NOTCH3-201ENST00000263388 EGR4Q05215 589 aa14.77□□□□□ -0.05
NOTCH3-201ENST00000263388 Q5PR19 223 aa14.77□□□□□ -0.05
NOTCH3-201ENST00000263388 C4orf51C9J302 202 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 SCO2A0A1W2PP80 73 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 IGLV3-21P80748 117 aaPredicted RBP14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 TMEM74BQ9NUR3 256 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 LY6EQ16553 131 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 OR4X2Q8NGF9 303 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 ZIC3O60481 467 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 RTN4RL2Q86UN3 420 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 IZUMO1RA6ND01 250 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 HAX1O00165 279 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 IGHV4-39P01824 125 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 TMEM106BQ9NUM4 274 aa14.76□□□□□ -0.05
NOTCH3-201ENST00000263388 CD69Q07108 199 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 TEX45Q8NA69 505 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 IFI27L2Q9H2X8 130 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 SLC25A15Q9Y619 301 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 TUBA4BQ9H853 241 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 ADAMTS9Q9P2N4 1935 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 PRR19A6NJB7 356 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 CRPP02741 224 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 GGTLC3B5MD39 225 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 PF4P02776 101 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 OR52E5Q8NH55 327 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 C1QTNF5Q9BXJ0 243 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 GSN-AS1Q9NRJ2 163 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 SEMA5BQ9P283 1151 aa14.75□□□□□ -0.05
NOTCH3-201ENST00000263388 MESP2Q0VG99 397 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 ARPC1AQ92747 370 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 IMMP2LQ96T52 175 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 FOXA2Q9Y261 457 aaPredicted RBP14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 H3BTX0 84 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 KBTBD11-OT1A0A1B0GTJ5 212 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 CHCHD2Q9Y6H1 151 aaPredicted RBP14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 TDGF1P13385 188 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 SRSF4Q08170 494 aaKnown RBP14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 DPM3Q9P2X0 92 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 ATXN7O15265 892 aaPredicted RBP14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 CDK2AP2O75956 126 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 CRYBA2P53672 197 aa14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 FOXA3P55318 350 aaPredicted RBP14.74□□□□□ -0.05
NOTCH3-201ENST00000263388 IGKV3-20P01619 116 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 IGFBP2P18065 325 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 TFF3Q07654 80 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 C9JCJ5 164 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 CYSLTR1Q9Y271 337 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 TRAV12-3A0A0B4J271 114 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 TRAV24A0A0B4J272 114 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 RTBDNQ9BSG5 229 aaPredicted RBP14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 SRP19P09132 144 aaKnown RBP14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 FER1L6-AS1Q8NA97 138 aa14.73□□□□□ -0.05
NOTCH3-201ENST00000263388 Q9H3A6 140 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms