RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 MIR17HGQ75NE6 70 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 GTSCR1Q86UQ5 136 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 OR9G1Q8NH87 305 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 TRAV5A0A0B4J249 113 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 ZXDCQ2QGD7 858 aaPredicted RBP10.85□□□□□ -0.67
TTC39A-202ENST00000262676 Q9H3A6 140 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 TBX6O95947 436 aaPredicted RBP10.85□□□□□ -0.67
TTC39A-202ENST00000262676 RFPL3SP0C7P2 107 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 ZNF708P17019 499 aa10.85□□□□□ -0.67
TTC39A-202ENST00000262676 TOMM40O96008 361 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 CD7P09564 240 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 ZNF479Q96JC4 524 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 CYSLTR1Q9Y271 337 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 PSCAO43653 123 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 DEFB104AQ8WTQ1 72 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 EPDR1Q9UM22 224 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 NUP214P35658 2090 aaPredicted RBP10.84□□□□□ -0.67
TTC39A-202ENST00000262676 CD28P10747 220 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 C8orf82Q6P1X6 216 aaPredicted RBP10.84□□□□□ -0.67
TTC39A-202ENST00000262676 GATAD1Q8WUU5 269 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 SCARF2Q96GP6 870 aaPredicted RBP10.84□□□□□ -0.67
TTC39A-202ENST00000262676 SPSB2Q99619 263 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 LAMTOR3Q9UHA4 124 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
TTC39A-202ENST00000262676 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
TTC39A-202ENST00000262676 ZP1P60852 638 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 EGR4Q05215 589 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 PEMTQ9UBM1 199 aa10.84□□□□□ -0.67
TTC39A-202ENST00000262676 IGKCP01834 107 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 UCP3P55916 312 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 OR52E5Q8NH55 327 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 PLAC1Q9HBJ0 212 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 IGHV1-69-2A0A0G2JMI3 117 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 IFI27L2Q9H2X8 130 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 FBXL15Q9H469 300 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 ACACAQ13085 2346 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 PPIFP30405 207 aaKnown RBP10.83□□□□□ -0.68
TTC39A-202ENST00000262676 SSBP2P81877 361 aaPredicted RBP10.83□□□□□ -0.68
TTC39A-202ENST00000262676 KLF14Q8TD94 323 aaPredicted RBP10.83□□□□□ -0.68
TTC39A-202ENST00000262676 ZNF625Q96I27 306 aaPredicted RBP10.83□□□□□ -0.68
TTC39A-202ENST00000262676 G6PC2Q9NQR9 355 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 MS4A6AQ9H2W1 248 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 ERG28Q9UKR5 140 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 SLC25A47Q6Q0C1 308 aa10.83□□□□□ -0.68
TTC39A-202ENST00000262676 VDAC2P45880 294 aaPredicted RBP10.82□□□□□ -0.68
TTC39A-202ENST00000262676 Q96M66 194 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 PKIBQ9C010 78 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 A0A1W2PRS3 328 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A10PA6NDY2 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A18PA6NE21 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A16PA6NEW6 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A20PA6NIJ5 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A8PA6NJQ4 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A7PA6NKC0 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A22PA8MWA6 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A12PA8MX19 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A5PA8MXJ8 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A23PA8MXZ1 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A15PP0C7V4 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A13PP0C7W8 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A14PP0C7W9 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 FAM90A24PP0C7X0 464 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 ZNF124Q15973 351 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 C8orf46Q8TAG6 207 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 SRXN1Q9BYN0 137 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 PLNP26678 52 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 SRSF1Q07955 248 aaKnown RBP eCLIP10.82□□□□□ -0.68
TTC39A-202ENST00000262676 CD300EQ496F6 205 aaPredicted RBP10.82□□□□□ -0.68
TTC39A-202ENST00000262676 C7orf69Q9H7B7 122 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
TTC39A-202ENST00000262676 ZNF729A6NN14 1252 aaPredicted RBP10.82□□□□□ -0.68
TTC39A-202ENST00000262676 IGKV1D-33P01593 117 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 IGKV1-33P01594 117 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 LGALS1P09382 135 aaKnown RBP10.82□□□□□ -0.68
TTC39A-202ENST00000262676 PRSS53Q2L4Q9 553 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 A0A0G2JMM0 328 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 A0A1W2PPB8 328 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 KIR3DP1A8MWS1 328 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 BSPH1Q075Z2 132 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 LHFPL6Q9Y693 200 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 SCN5AQ14524 2016 aa10.82□□□□□ -0.68
TTC39A-202ENST00000262676 NAPSAO96009 420 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 PRB3Q04118 309 aaPredicted RBP10.81□□□□□ -0.68
TTC39A-202ENST00000262676 ASPHD2Q6ICH7 369 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 FAM57AQ8TBR7 257 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 GTSF1LQ9H1H1 148 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 TRAV9-2A0A087WT02 112 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 PAX1P15863 534 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 ZNF415Q09FC8 603 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 ZNF646O15015 1829 aaPredicted RBP10.81□□□□□ -0.68
TTC39A-202ENST00000262676 GZMMP51124 257 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 STHQ8IWL8 128 aa10.81□□□□□ -0.68
TTC39A-202ENST00000262676 CARHSP1Q9Y2V2 147 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms