RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CKS1BP61024 79 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 RNASE7Q9H1E1 156 aaKnown RBP12.01□□□□□ -0.49
CUX2-201ENST00000261726 CD28P10747 220 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 RTN4RL2Q86UN3 420 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 TM4SF5O14894 197 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 CDK2AP2O75956 126 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 IZUMO1RA6ND01 250 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 RAMP1O60894 148 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 CIARTQ8N365 385 aaPredicted RBP12.01□□□□□ -0.49
CUX2-201ENST00000261726 OR9G4Q8NGQ1 327 aa12.01□□□□□ -0.49
CUX2-201ENST00000261726 KBTBD11-OT1A0A1B0GTJ5 212 aa12□□□□□ -0.49
CUX2-201ENST00000261726 RLFQ13129 1914 aa12□□□□□ -0.49
CUX2-201ENST00000261726 NHLRC3Q5JS37 347 aa12□□□□□ -0.49
CUX2-201ENST00000261726 S100A7L2Q5SY68 101 aa12□□□□□ -0.49
CUX2-201ENST00000261726 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
CUX2-201ENST00000261726 FOXD3Q9UJU5 478 aaPredicted RBP12□□□□□ -0.49
CUX2-201ENST00000261726 CITED2Q99967 270 aaPredicted RBP12□□□□□ -0.49
CUX2-201ENST00000261726 MEGF9Q9H1U4 602 aa12□□□□□ -0.49
CUX2-201ENST00000261726 TRAV8-4A0A0B4J246 113 aa12□□□□□ -0.49
CUX2-201ENST00000261726 HBDP02042 147 aa12□□□□□ -0.49
CUX2-201ENST00000261726 GTSCR1Q86UQ5 136 aa12□□□□□ -0.49
CUX2-201ENST00000261726 ZIC4Q8N9L1 334 aa12□□□□□ -0.49
CUX2-201ENST00000261726 COQ2Q96H96 371 aa12□□□□□ -0.49
CUX2-201ENST00000261726 PRDM6Q9NQX0 595 aa12□□□□□ -0.49
CUX2-201ENST00000261726 TCRBV4S1A1TA0A5B7 111 aa12□□□□□ -0.49
CUX2-201ENST00000261726 CD33P20138 364 aa12□□□□□ -0.49
CUX2-201ENST00000261726 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
CUX2-201ENST00000261726 PPP1R32Q7Z5V6 425 aa12□□□□□ -0.49
CUX2-201ENST00000261726 CST9LQ9H4G1 147 aa12□□□□□ -0.49
CUX2-201ENST00000261726 ADARB2-AS1A8MUL3 147 aa12□□□□□ -0.49
CUX2-201ENST00000261726 LINC00158P58513 81 aa12□□□□□ -0.49
CUX2-201ENST00000261726 SAMD13Q5VXD3 122 aa12□□□□□ -0.49
CUX2-201ENST00000261726 CHCHD5Q9BSY4 110 aa12□□□□□ -0.49
CUX2-201ENST00000261726 GHRHP01286 108 aa11.99□□□□□ -0.49
CUX2-201ENST00000261726 CELA3BP08861 270 aa11.99□□□□□ -0.49
CUX2-201ENST00000261726 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
CUX2-201ENST00000261726 IGHV2OR16-5A0A0B4J2B6 119 aa11.99□□□□□ -0.49
CUX2-201ENST00000261726 CCL3L1P16619 93 aa11.99□□□□□ -0.49
CUX2-201ENST00000261726 SRSF6Q13247 344 aaKnown RBP11.99□□□□□ -0.49
CUX2-201ENST00000261726 MYO16Q9Y6X6 1858 aa11.99□□□□□ -0.49
CUX2-201ENST00000261726 EFNB1P98172 346 aa11.99□□□□□ -0.49
CUX2-201ENST00000261726 ZNF585BQ52M93 769 aa11.99□□□□□ -0.49
CUX2-201ENST00000261726 SLC25A2Q9BXI2 301 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 SNRNP200O75643 2136 aaKnown RBP11.98□□□□□ -0.49
CUX2-201ENST00000261726 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
CUX2-201ENST00000261726 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 LHFPL4Q7Z7J7 247 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 A0A0G2JMM0 328 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 A0A1W2PPB8 328 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 A0A1W2PRS3 328 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 KIR3DP1A8MWS1 328 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 TFF1P04155 84 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 ADMP35318 185 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
CUX2-201ENST00000261726 OTORQ9NRC9 128 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 CHTOPQ9Y3Y2 248 aaKnown RBP11.98□□□□□ -0.49
CUX2-201ENST00000261726 MYOD1P15172 320 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 ICE1Q9Y2F5 2266 aa11.98□□□□□ -0.49
CUX2-201ENST00000261726 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 FABP5P3A8MUU1 101 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 NBR2O15453 112 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 SCN8AQ9UQD0 1980 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 A0A0G2JMZ2 1700 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 GGTLC3B5MD39 225 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 HOXA3O43365 443 aaPredicted RBP11.97□□□□□ -0.49
CUX2-201ENST00000261726 MAP1BP46821 2468 aaKnown RBP11.97□□□□□ -0.49
CUX2-201ENST00000261726 LINC01590Q5TEZ4 76 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 GP6Q9HCN6 339 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 WDR81Q562E7 1941 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 IGHV3-73A0A0B4J1V6 119 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 SRSF4Q08170 494 aaKnown RBP11.97□□□□□ -0.49
CUX2-201ENST00000261726 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
CUX2-201ENST00000261726 IGHV1-2P23083 117 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 Q6AWC8 147 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 SPSB2Q99619 263 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 A0A1B0GW15 77 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 SRSF1Q07955 248 aaKnown RBP eCLIP11.97□□□□□ -0.49
CUX2-201ENST00000261726 ANAPC13Q9BS18 74 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 SAA2-SAA4A0A096LPE2 208 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 UMODP07911 640 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 SAA2P0DJI9 122 aaPredicted RBP11.97□□□□□ -0.49
CUX2-201ENST00000261726 RIPPLY3P57055 190 aa11.97□□□□□ -0.49
CUX2-201ENST00000261726 FAM57AQ8TBR7 257 aa11.96□□□□□ -0.49
CUX2-201ENST00000261726 C5orf30Q96GV9 206 aa11.96□□□□□ -0.49
CUX2-201ENST00000261726 PRSS22Q9GZN4 317 aa11.96□□□□□ -0.49
CUX2-201ENST00000261726 TDRD6O60522 2096 aaKnown RBP11.96□□□□□ -0.49
CUX2-201ENST00000261726 SERF1AO75920 110 aa11.96□□□□□ -0.49
CUX2-201ENST00000261726 SRP19P09132 144 aaKnown RBP11.96□□□□□ -0.49
CUX2-201ENST00000261726 NRN1LQ496H8 165 aa11.96□□□□□ -0.49
CUX2-201ENST00000261726 CD200R1LQ6Q8B3 271 aa11.96□□□□□ -0.49
CUX2-201ENST00000261726 C8orf46Q8TAG6 207 aa11.96□□□□□ -0.5
CUX2-201ENST00000261726 SCN2AQ99250 2005 aa11.96□□□□□ -0.5
CUX2-201ENST00000261726 IGKV1D-43A0A0B4J1Z2 117 aa11.96□□□□□ -0.5
CUX2-201ENST00000261726 DPM2O94777 84 aa11.96□□□□□ -0.5
CUX2-201ENST00000261726 LINC00527Q9UJ94 153 aa11.96□□□□□ -0.5
CUX2-201ENST00000261726 RP1P56715 2156 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms