RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 EBLN2Q6P2I7 272 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 NAV3Q8IVL0 2385 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 IGKV1D-17A0A075B6S4 117 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 HLA-DQA1P01909 254 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 FOXA3P55318 350 aaPredicted RBP13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PRR20EP86478 221 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PRR20CP86479 221 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PRR20DP86480 221 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PRR20BP86481 221 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PRR20AP86496 221 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 DUX4L9Q6RFH8 374 aaPredicted RBP13.03□□□□□ -0.32
LMNB1-201ENST00000261366 VHLLQ6RSH7 139 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 KLHDC1Q8N7A1 406 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 DEFB108BQ8NET1 73 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 OR51B2Q9Y5P1 312 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 TRGV5A0A0B4J1U4 118 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 IGLV2-8P01709 118 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 IGLL1P15814 213 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 HOXC12P31275 282 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 HSPE1P61604 102 aaKnown RBP13.03□□□□□ -0.32
LMNB1-201ENST00000261366 GDF5OSQ5U4N7 250 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 OR10W1Q8NGF6 305 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 CORTO00230 105 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.33
LMNB1-201ENST00000261366 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.33
LMNB1-201ENST00000261366 VAMP3Q15836 100 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 SPACA3Q8IXA5 215 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 OR4S2Q8NH73 311 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 RND1Q92730 232 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 OSTCQ9NRP0 149 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 BET1LQ9NYM9 111 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 SELENOKQ9Y6D0 94 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 LAMA5O15230 3695 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 LOC102724200A0A096LPH7 203 aaPredicted RBP13.02□□□□□ -0.33
LMNB1-201ENST00000261366 J3QR06 171 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 OR2D3Q8NGH3 330 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 CHODLQ9H9P2 273 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 TMEM167BQ9NRX6 74 aa13.02□□□□□ -0.33
LMNB1-201ENST00000261366 TNFSF15O95150 251 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 RBX1P62877 108 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 ZNF738Q8NE65 137 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 OR4C5Q8NGB2 326 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 OR8B2Q96RD0 313 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 IDI2-AS1Q9NZ38 188 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 PLCE1Q9P212 2302 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 FAM181BA6NEQ2 426 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 IGKV1-16P04430 117 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 LOXL3P58215 753 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 GNG5P63218 68 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 CT45A1Q5HYN5 189 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 OR2T6Q8NHC8 308 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 CT45A3Q8NHU0 189 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 ALKBH7Q9BT30 221 aaPredicted RBP13.01□□□□□ -0.33
LMNB1-201ENST00000261366 COX11Q9Y6N1 276 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 DMXL2Q8TDJ6 3036 aa13.01□□□□□ -0.33
LMNB1-201ENST00000261366 CD59P13987 128 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 VWA1Q6PCB0 445 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 DHRS13Q6UX07 377 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 C22orf15Q8WYQ4 148 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 ARL2-SNX15V9GYD0 113 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 ZNF318Q5VUA4 2279 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 KLRC4-KLRK1H3BQV0 150 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 ISLRO14498 428 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
LMNB1-201ENST00000261366 CECR9P0C854 216 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 SSBP2P81877 361 aaPredicted RBP13□□□□□ -0.33
LMNB1-201ENST00000261366 CALYQ9NYX4 217 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 CACNA1GO43497 2377 aa13□□□□□ -0.33
LMNB1-201ENST00000261366 TPRP12270 2363 aaKnown RBP13□□□□□ -0.33
LMNB1-201ENST00000261366 SMIM27A0A1W2PRY6 76 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 INTS1Q8N201 2190 aaKnown RBP12.99□□□□□ -0.33
LMNB1-201ENST00000261366 IZUMO1RA6ND01 250 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 H3BTX0 84 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 ZNF883P0CG24 379 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 PPOXP50336 477 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 LINC00173Q6ZV60 143 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 MOGAT3Q86VF5 341 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 FAM90A1Q86YD7 464 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 PRR7Q8TB68 274 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 ORAOV1Q8WV07 137 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 SNRNP40Q96DI7 357 aaKnown RBP12.99□□□□□ -0.33
LMNB1-201ENST00000261366 ZPBPQ9BS86 351 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 SPRY4Q9C004 299 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 JPT1Q9UK76 154 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 DYSFO75923 2080 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 LOC105371242A0A075B767 164 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 hDV102S1A0JD36 115 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 SELENOVP59797 346 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 C19orf35Q6ZS72 473 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 NEUROG1Q92886 237 aa12.99□□□□□ -0.33
LMNB1-201ENST00000261366 LOXL4Q96JB6 756 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms