RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 COMMD1Q8N668 190 aa17.85■□□□□ 0.45
SIX3-201ENST00000260653 OR2T10Q8NGZ9 312 aa17.85■□□□□ 0.45
SIX3-201ENST00000260653 MALSU1Q96EH3 234 aa17.85■□□□□ 0.45
SIX3-201ENST00000260653 P2RX4Q99571 388 aa17.85■□□□□ 0.45
SIX3-201ENST00000260653 TMEM218A2RU14 115 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 MPDU1O75352 247 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 AREGP15514 252 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 NPBQ8NG41 125 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 SCRT1Q9BWW7 348 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 APCP25054 2843 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.84■□□□□ 0.45
SIX3-201ENST00000260653 NPFFO15130 113 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 NDUFA3O95167 84 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 CD5P06127 495 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 FABP1P07148 127 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 AKR1D1P51857 326 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 LFNGQ8NES3 379 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 KIAA1456Q9P272 454 aa17.84■□□□□ 0.45
SIX3-201ENST00000260653 IGHV3OR16-10A0A075B7F0 116 aa17.83■□□□□ 0.45
SIX3-201ENST00000260653 C9JQL5 133 aa17.83■□□□□ 0.45
SIX3-201ENST00000260653 COTL1Q14019 142 aa17.83■□□□□ 0.45
SIX3-201ENST00000260653 LCN15Q6UWW0 184 aa17.83■□□□□ 0.45
SIX3-201ENST00000260653 GGTLC1Q9BX51 225 aa17.83■□□□□ 0.45
SIX3-201ENST00000260653 MSMBP08118 114 aa17.83■□□□□ 0.44
SIX3-201ENST00000260653 ADCYAP1P18509 176 aa17.83■□□□□ 0.44
SIX3-201ENST00000260653 GUK1Q16774 197 aa17.83■□□□□ 0.44
SIX3-201ENST00000260653 C19orf35Q6ZS72 473 aa17.83■□□□□ 0.44
SIX3-201ENST00000260653 SRSF12Q8WXF0 261 aaKnown RBP17.83■□□□□ 0.44
SIX3-201ENST00000260653 TEX22C9J3V5 150 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 DEFA4P12838 97 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 SLC25A16P16260 332 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 TEPPQ6URK8 271 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 CD69Q07108 199 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 GAMTQ14353 236 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 TMEM95Q3KNT9 176 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 RUSC1-AS1Q66K80 236 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 Q8N6K4 173 aa17.82■□□□□ 0.44
SIX3-201ENST00000260653 EIF5A2Q9GZV4 153 aaKnown RBP17.82■□□□□ 0.44
SIX3-201ENST00000260653 FNDC10F2Z333 226 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 APOC3P02656 99 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 FGF8P55075 233 aaPredicted RBP17.81■□□□□ 0.44
SIX3-201ENST00000260653 GCSAMLQ5JQS6 135 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 OR10G4Q8NGN3 311 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 OR10G9Q8NGN4 311 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 OR10G7Q8NGN6 311 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 SSMEM1Q8WWF3 244 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 SLC25A22Q9H936 323 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 TRAV40A0A0B4J280 105 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 BTBD17A6NE02 478 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 MEOX2P50222 304 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 SUB1P53999 127 aaKnown RBP eCLIP17.81■□□□□ 0.44
SIX3-201ENST00000260653 EBI3Q14213 229 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 C5orf64Q2M2E5 130 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 FAM120AOSQ5T036 256 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 MIC13Q5XKP0 118 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 MBD3L1Q8WWY6 194 aa17.81■□□□□ 0.44
SIX3-201ENST00000260653 TRAV1-1A0A0B4J248 108 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 HBE1P02100 147 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 MBP02144 154 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 OPRK1P41145 380 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 FNDC4Q9H6D8 234 aaPredicted RBP17.8■□□□□ 0.44
SIX3-201ENST00000260653 IGKV1OR2-108A0A075B7D4 117 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 CNIH1O95406 144 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 SLC16A13Q7RTY0 426 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 MRPL41Q8IXM3 137 aaKnown RBP17.8■□□□□ 0.44
SIX3-201ENST00000260653 PXMP4Q9Y6I8 212 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 ZFHX3Q15911 3703 aa17.8■□□□□ 0.44
SIX3-201ENST00000260653 A0A096LNT2 108 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 MAP1LC3B2A6NCE7 125 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 NCBP2LA6PVI3 153 aaKnown RBP17.79■□□□□ 0.44
SIX3-201ENST00000260653 HMGB3O15347 200 aaKnown RBP17.79■□□□□ 0.44
SIX3-201ENST00000260653 MFAP2P55001 183 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 RARRES2Q99969 163 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 MAP1LC3BQ9GZQ8 125 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 ZANQ9Y493 2812 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 YIF1AO95070 293 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 BRD3OSQ6XYD6 125 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 TMEM144Q7Z5S9 345 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 OR2T6Q8NHC8 308 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 RNASEH2CQ8TDP1 164 aaKnown RBP17.79■□□□□ 0.44
SIX3-201ENST00000260653 PBDC1Q9BVG4 233 aa17.79■□□□□ 0.44
SIX3-201ENST00000260653 B4DSR2 109 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 SFTA3P0C7M3 94 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 HIST2H2BCQ6DN03 193 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 ZNF114Q8NC26 417 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 SLC39A9Q9NUM3 307 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 IGHV1-69DA0A0B4J2H0 117 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 IGHV1-69P01742 117 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 IGHV3-48P01763 117 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 HAGHQ16775 308 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 ACOT6Q3I5F7 207 aaPredicted RBP17.78■□□□□ 0.44
SIX3-201ENST00000260653 CACNG8Q8WXS5 425 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 HIF1ANQ9NWT6 349 aa17.78■□□□□ 0.44
SIX3-201ENST00000260653 FAM106CPP0CH98 169 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 PPT1P50897 306 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 DEFB113Q30KQ7 82 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 STPG3Q8N7X2 389 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 ACY3Q96HD9 319 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 FAM103A1Q9BTL3 118 aaKnown RBP17.77■□□□□ 0.44
SIX3-201ENST00000260653 C7orf69Q9H7B7 122 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms