RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TUSC1Q2TAM9 212 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 IGHV3-11P01762 117 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 CRPP02741 224 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 H0YJW9 148 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 TRGV9Q99603 122 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 MAP1LC3AQ9H492 121 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 ZNF843Q8N446 348 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 RGP1Q92546 391 aaPredicted RBP11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 TRBV9A0A0B4J1U6 114 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 CGAP01215 116 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 RPL29P47914 159 aaKnown RBP11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 FOXC2Q99958 501 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 CLDN16Q9Y5I7 305 aa11.03□□□□□ -0.64
PRPF38A-201ENST00000257181 A0A1B0GWJ7 208 aa11.02□□□□□ -0.64
PRPF38A-201ENST00000257181 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.64
PRPF38A-201ENST00000257181 ZNF56Q15929 161 aa11.02□□□□□ -0.64
PRPF38A-201ENST00000257181 C5orf66Q9H5L9 145 aa11.02□□□□□ -0.64
PRPF38A-201ENST00000257181 WDR81Q562E7 1941 aa11.02□□□□□ -0.64
PRPF38A-201ENST00000257181 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 CIRBPQ14011 172 aaKnown RBP11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 MIC13Q5XKP0 118 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 C2orf88Q9BSF0 95 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 SCO1O75880 301 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 ELOBQ15370 118 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 ZNF585BQ52M93 769 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 TAS2R60P59551 318 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 SUPT4H1P63272 117 aaKnown RBP11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 PAQR4Q8N4S7 273 aaPredicted RBP11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 ZNF680Q8NEM1 530 aa11.02□□□□□ -0.65
PRPF38A-201ENST00000257181 DLX1P56177 255 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 ZFP30Q9Y2G7 519 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 TRAV9-2A0A087WT02 112 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 ARTNQ5T4W7 220 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 J3QRE1 110 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 CXCL2P19875 107 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 PRSS2P07478 247 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 NTF3P20783 257 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 PLAC9Q5JTB6 97 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 BRD3OSQ6XYD6 125 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 C1QL4Q86Z23 238 aa11.01□□□□□ -0.65
PRPF38A-201ENST00000257181 CD5LO43866 347 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 Q6P435 159 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
PRPF38A-201ENST00000257181 IGKV1D-17A0A075B6S4 117 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 FSTL3O95633 263 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
PRPF38A-201ENST00000257181 MAP1LC3CQ9BXW4 147 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 H3BRM9 83 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 MLNRO43193 412 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 PLAUP00749 431 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 FOXE3Q13461 319 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 C15orf32Q32M92 178 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 GCHFRP30047 84 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 INSL3P51460 131 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 C1orf194Q5T5A4 169 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 ANAPC1Q9H1A4 1944 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 PRSS1P07477 247 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 OR5AL1P0C617 328 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 FOXG1P55316 489 aaPredicted RBP11□□□□□ -0.65
PRPF38A-201ENST00000257181 IBA57Q5T440 356 aaKnown RBP11□□□□□ -0.65
PRPF38A-201ENST00000257181 RNASEKQ6P5S7 137 aaKnown RBP11□□□□□ -0.65
PRPF38A-201ENST00000257181 SIGLEC9Q9Y336 463 aa11□□□□□ -0.65
PRPF38A-201ENST00000257181 SLAQ13239 276 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 PCM1Q15154 2024 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 IGKV1-9A0A0C4DH69 117 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 TMEM262E9PQX1 116 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 HLA-DQA1P01909 254 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 APCSP02743 223 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 Q1RN00 199 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 ATP6V0BQ99437 205 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 SOSTQ9BQB4 213 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 TRGV4A0A0C4DH28 118 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 FGF8P55075 233 aaPredicted RBP10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 NHLH2Q02577 135 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 NEUROG1Q92886 237 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 RALGAPA1Q6GYQ0 2036 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 NAPSAO96009 420 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 EGR1P18146 543 aa10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 HINT1P49773 126 aaPredicted RBP10.99□□□□□ -0.65
PRPF38A-201ENST00000257181 NPIPB5A8MRT5 1133 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 TOMM40O96008 361 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 FOXI3A8MTJ6 420 aaPredicted RBP10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 H0Y8G0 127 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 KLRD1Q13241 179 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 RBM38Q9H0Z9 239 aaKnown RBP10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 KNL1Q8NG31 2342 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 WT1P19544 449 aaPredicted RBP10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 NPCDR1Q9BY65 106 aa10.98□□□□□ -0.65
PRPF38A-201ENST00000257181 VENTXO95231 258 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms