RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 SHISA9B4DS77 424 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 CGB3P0DN86 165 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 CGB7P0DN87 165 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 CRYBB3P26998 211 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 ZNF672Q499Z4 452 aaPredicted RBP12.81□□□□□ -0.36
RFX1-201ENST00000254325 A0A1B0GWJ7 208 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 C5orf52A6NGY3 159 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 LY6HO94772 140 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 LOXP28300 417 aaPredicted RBP12.81□□□□□ -0.36
RFX1-201ENST00000254325 DLX1P56177 255 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 G0S2P27469 103 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 PAXXQ9BUH6 204 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 DERL1Q9BUN8 251 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
RFX1-201ENST00000254325 ELOA3CA0A087WX78 387 aaPredicted RBP12.8□□□□□ -0.36
RFX1-201ENST00000254325 GPR6P46095 362 aaPredicted RBP12.8□□□□□ -0.36
RFX1-201ENST00000254325 LY6DQ14210 128 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 VWC2Q2TAL6 325 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 C2orf83Q53S99 150 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 ZNF439Q8NDP4 499 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 CACNG8Q8WXS5 425 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 GPR61Q9BZJ8 451 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 FBXL15Q9H469 300 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 SRP14P37108 136 aaKnown RBP12.8□□□□□ -0.36
RFX1-201ENST00000254325 LYZP61626 148 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 DIAPH2-AS1Q14236 149 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 GAMTQ14353 236 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 CMTM2Q8TAZ6 248 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 CTSZQ9UBR2 303 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 HTR1DP28221 377 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 GRNP28799 593 aaKnown RBP12.8□□□□□ -0.36
RFX1-201ENST00000254325 SELENOTP62341 195 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 C1orf229Q6ZS94 237 aaPredicted RBP12.8□□□□□ -0.36
RFX1-201ENST00000254325 OR4A5Q8NH83 315 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 ZNF835Q9Y2P0 537 aa12.8□□□□□ -0.36
RFX1-201ENST00000254325 HCFC1P51610 2035 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 SCGB2A1O75556 95 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 MOSP00540 346 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 SLC25A5P05141 298 aaKnown RBP12.79□□□□□ -0.36
RFX1-201ENST00000254325 C1QTNF9P0C862 333 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 TMEM155Q4W5P6 130 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 TMEM177Q53S58 311 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 TCF23Q7RTU1 214 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 DAZAP1Q96EP5 407 aaKnown RBP12.79□□□□□ -0.36
RFX1-201ENST00000254325 SRD5A3Q9H8P0 318 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 IGHV2-26A0A0B4J1V2 119 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 FOXH1O75593 365 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 CDX1P47902 265 aaPredicted RBP12.79□□□□□ -0.36
RFX1-201ENST00000254325 BAGE3Q86Y29 109 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 BAGE2Q86Y30 109 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 TMEM167AQ8TBQ9 72 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 SFRP2Q96HF1 295 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 C19orf24Q9BVV8 132 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 UBE2CO00762 179 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 TOX4O94842 621 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
RFX1-201ENST00000254325 TCL1AP56279 114 aa12.79□□□□□ -0.36
RFX1-201ENST00000254325 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
RFX1-201ENST00000254325 POU2AF1Q16633 256 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 ST6GALNAC3Q8NDV1 305 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 PERPQ96FX8 193 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BKO60814 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BJP06899 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BOP23527 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BBP33778 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BDP58876 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BCP62807 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST2H2BEQ16778 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 RPEL1Q2QD12 228 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.78□□□□□ -0.36
RFX1-201ENST00000254325 OR5AN1Q8NGI8 311 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BHQ93079 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BNQ99877 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 HIST1H2BMQ99879 126 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 SAMD10Q9BYL1 202 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 FREM2Q5SZK8 3169 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 LOC105371242A0A075B767 164 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
RFX1-201ENST00000254325 C1QL4Q86Z23 238 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 RNASEH2CQ8TDP1 164 aaKnown RBP12.78□□□□□ -0.36
RFX1-201ENST00000254325 DSCAMO60469 2012 aa12.78□□□□□ -0.36
RFX1-201ENST00000254325 PTPRBP23467 1997 aa12.77□□□□□ -0.36
RFX1-201ENST00000254325 NDUFS6O75380 124 aaKnown RBP12.77□□□□□ -0.37
RFX1-201ENST00000254325 NHLH1Q02575 133 aa12.77□□□□□ -0.37
RFX1-201ENST00000254325 HYPMO75409 117 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 SFTPCP11686 197 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 C9orf152Q5JTZ5 239 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 TMEM18Q96B42 140 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 ZNF331Q9NQX6 463 aaPredicted RBP12.76□□□□□ -0.37
RFX1-201ENST00000254325 ARFGEF3Q5TH69 2177 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 TRBV24-1A0A075B6N3 115 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 HOXA5P20719 270 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 PACRGQ96M98 296 aaPredicted RBP12.76□□□□□ -0.37
RFX1-201ENST00000254325 RASL11BQ9BPW5 248 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 MRPL32Q9BYC8 188 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms