RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 LSM4Q9Y4Z0 139 aaKnown RBP11.92□□□□□ -0.5
MBD4-201ENST00000249910 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
MBD4-201ENST00000249910 IGKV1OR2-108A0A075B7D4 117 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 IGFBP2P18065 325 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 KIAA0141Q14154 515 aaPredicted RBP11.91□□□□□ -0.5
MBD4-201ENST00000249910 ACOT6Q3I5F7 207 aaPredicted RBP11.91□□□□□ -0.5
MBD4-201ENST00000249910 RPUSD4Q96CM3 377 aaKnown RBP11.91□□□□□ -0.5
MBD4-201ENST00000249910 CELSR2Q9HCU4 2923 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
MBD4-201ENST00000249910 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 A0A1W2PPV4 95 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 CNTFRP26992 372 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 PPOXP50336 477 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 TMEM177Q53S58 311 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 TEPPQ6URK8 271 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 LINC00311Q8N616 119 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 OR51G1Q8NGK1 321 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 TVP23CQ96ET8 276 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 RAB1BQ9H0U4 201 aa11.91□□□□□ -0.5
MBD4-201ENST00000249910 ZNF430Q9H8G1 570 aaPredicted RBP11.91□□□□□ -0.5
MBD4-201ENST00000249910 C22orf46C9J442 243 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 OR2C1O95371 312 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 IGLV2-23P01705 113 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 CDKN1AP38936 164 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.5
MBD4-201ENST00000249910 SLC35E3Q7Z769 313 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 OR4F5Q8NH21 305 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 CBLN4Q9NTU7 201 aa11.9□□□□□ -0.5
MBD4-201ENST00000249910 REG1AP05451 166 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 OPRK1P41145 380 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 PSMB3P49720 205 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 ARF6P62330 175 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 STPG3Q8N7X2 389 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 ZNF596Q8TC21 504 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 MALSU1Q96EH3 234 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 NDUFA4L2Q9NRX3 87 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 WASHC3Q9Y3C0 194 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 IGLV1-47P01700 117 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 GNLYP22749 145 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 WT1-ASQ06250 92 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 CENPEQ02224 2701 aa11.89□□□□□ -0.51
MBD4-201ENST00000249910 MPDU1O75352 247 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 ACTL6BO94805 426 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 IFNA1P01562 189 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 OR10D4PQ8NGN7 298 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 ARL14EPLP0DKL9 152 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
MBD4-201ENST00000249910 RAB5AP20339 215 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 ZNF137PP52743 207 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 LDLRAD2Q5SZI1 272 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 CST9LP1Q5W188 147 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 C11orf71Q6IPW1 123 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 C19orf35Q6ZS72 473 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 OR2T6Q8NHC8 308 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 SMIM7Q9BQ49 75 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 SNHG12Q9BXW3 62 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
MBD4-201ENST00000249910 PNKDQ8N490 385 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 C8orf31Q8N9H6 132 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 OR8B3Q8NGG8 313 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 OR1L8Q8NGR8 309 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 OR5R1Q8NH85 324 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 OR8B2Q96RD0 313 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 P2RX4Q99571 388 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 A0A1W2PRD5 423 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 A0A1W2PRF3 423 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 A0A1W2PRM7 423 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 SEC14L6B5MCN3 397 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 FOXH1O75593 365 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 USF1P22415 310 aaPredicted RBP11.87□□□□□ -0.51
MBD4-201ENST00000249910 ATP5G3P48201 142 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
MBD4-201ENST00000249910 A0A1W2PN81 502 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 C11orf94C9JXX5 98 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 NPPCP23582 126 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 CHRNA7P36544 502 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 RNASE8Q8TDE3 154 aaKnown RBP11.86□□□□□ -0.51
MBD4-201ENST00000249910 CLEC7AQ9BXN2 247 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 AURKAIP1Q9NWT8 199 aaPredicted RBP11.86□□□□□ -0.51
MBD4-201ENST00000249910 CD24P25063 80 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 LGALS4P56470 323 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 MRGPRG-AS1Q2M3A8 158 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 HCP5Q6MZN7 132 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 SMIM15Q7Z3B0 74 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 C1QL4Q86Z23 238 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 OR4P4Q8NGL7 312 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 NEIL1Q96FI4 390 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms