RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 PBOV1Q9GZY1 135 aa9.15□□□□□ -0.94
RFPL3-201ENST00000249007 MED20Q9H944 212 aa9.15□□□□□ -0.94
RFPL3-201ENST00000249007 ISG20L2Q9H9L3 353 aaKnown RBP9.15□□□□□ -0.94
RFPL3-201ENST00000249007 ADGRL4Q9HBW9 690 aa9.15□□□□□ -0.94
RFPL3-201ENST00000249007 LYRM2Q9NU23 88 aaPredicted RBP9.15□□□□□ -0.94
RFPL3-201ENST00000249007 KLHDC2Q9Y2U9 406 aa9.15□□□□□ -0.94
RFPL3-201ENST00000249007 IGHV4OR15-8A0A075B7B6 117 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 A0A087WW49 117 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 TMEM238C9JI98 176 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 K7EPK0 472 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 SIRPB1O00241 398 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 HSD17B6O14756 317 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 CSTBP04080 98 aaKnown RBP9.15□□□□□ -0.95
RFPL3-201ENST00000249007 OR2T7P0C7T2 308 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 TRGC1P0CF51 173 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.95
RFPL3-201ENST00000249007 RAB9AP51151 201 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 OR10X1Q8NGY0 326 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 OR1P1Q8NH06 330 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 MRPS28Q9Y2Q9 187 aaKnown RBP9.15□□□□□ -0.95
RFPL3-201ENST00000249007 WSB1Q9Y6I7 421 aa9.15□□□□□ -0.95
RFPL3-201ENST00000249007 FAT2Q9NYQ8 4349 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 IGHV1-3A0A0C4DH29 117 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 C9JQL5 133 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 G3V318 75 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 IGLV1-40P01703 118 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 AMBPP02760 352 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 REG1BP48304 166 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 FHITP49789 147 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 SNU13P55769 128 aaKnown RBP9.14□□□□□ -0.95
RFPL3-201ENST00000249007 ZNF146Q15072 292 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 C17orf58Q2M2W7 97 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 Q6ZRG5 221 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 LINC01551Q86U37 167 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 Q8IYB0 196 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 GPR148Q8TDV2 347 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 RNF126Q9BV68 326 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 CSTL1Q9H114 145 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 SLC2A9Q9NRM0 540 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 OR6C3Q9NZP0 311 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 HSPB7Q9UBY9 170 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 PSG11Q9UQ72 335 aa9.14□□□□□ -0.95
RFPL3-201ENST00000249007 DNAH2Q9P225 4427 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 DNAH11Q96DT5 4516 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 KBTBD11-OT1A0A1B0GTJ5 212 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 HLA-AP01891 365 aaKnown RBP9.13□□□□□ -0.95
RFPL3-201ENST00000249007 CD37P11049 281 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 RPS11P62280 158 aaKnown RBP eCLIP9.13□□□□□ -0.95
RFPL3-201ENST00000249007 UBE2V1Q13404 147 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 MORN2Q502X0 79 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
RFPL3-201ENST00000249007 FAM58AQ8N1B3 248 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 TVP23CQ96ET8 276 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 SCGB3A2Q96PL1 93 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 KRTAP4-5Q9BYR2 181 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 SRD5A3Q9H8P0 318 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 DNAJC4Q9NNZ3 241 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 CMC2Q9NRP2 79 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 TPSG1Q9NRR2 321 aa9.13□□□□□ -0.95
RFPL3-201ENST00000249007 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 IGKV1-27A0A075B6S5 117 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 TRBV2A0A0J9YWF9 115 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 FAM90A10PA6NDY2 464 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 TMEM235A6NFC5 223 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 H0Y980 276 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 HPRT1P00492 218 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 MOSP00540 346 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 LGALS1P09382 135 aaKnown RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 SCGB1A1P11684 91 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 NPBWR2P48146 333 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 UBE2G2P60604 165 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 MFGE8Q08431 387 aaPredicted RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 ZNF816Q0VGE8 651 aaPredicted RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 ACOT6Q3I5F7 207 aaPredicted RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 CEMP1Q6PRD7 247 aaPredicted RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 TCF24Q7RTU0 167 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 CPOQ8IVL8 374 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 H1FOOQ8IZA3 346 aaPredicted RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 SUMF2Q8NBJ7 301 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 ABHD5Q8WTS1 349 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 Q8WTZ3 238 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 PTX4Q96A99 478 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 C4orf36Q96KX1 117 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
RFPL3-201ENST00000249007 AK6Q9Y3D8 172 aaKnown RBP9.12□□□□□ -0.95
RFPL3-201ENST00000249007 SH2D1BO14796 132 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 SCGNO76038 276 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 OR2H2O95918 312 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 TTRP02766 147 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 HSPB1P04792 205 aaKnown RBP9.11□□□□□ -0.95
RFPL3-201ENST00000249007 CTXN2P0C2S0 81 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 ALOX5APP20292 161 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 ZNF85Q03923 595 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 LGALS9CQ6DKI2 356 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 RNASE8Q8TDE3 154 aaKnown RBP9.11□□□□□ -0.95
RFPL3-201ENST00000249007 FLYWCH2Q96CP2 140 aaKnown RBP9.11□□□□□ -0.95
RFPL3-201ENST00000249007 COQ2Q96H96 371 aa9.11□□□□□ -0.95
RFPL3-201ENST00000249007 PYGO2Q9BRQ0 406 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms