RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CORTO00230 105 aa18.52■□□□□ 0.56
SDF2L1-201ENST00000248958 SPINK9Q5DT21 86 aa18.52■□□□□ 0.56
SDF2L1-201ENST00000248958 CENPSQ8N2Z9 138 aa18.52■□□□□ 0.56
SDF2L1-201ENST00000248958 MISP3Q96FF7 219 aa18.52■□□□□ 0.56
SDF2L1-201ENST00000248958 TXN2Q99757 166 aa18.52■□□□□ 0.56
SDF2L1-201ENST00000248958 A6NHS1 94 aa18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 A8MWP6 167 aa18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 SULT1A3P0DMM9 295 aa18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 SULT1A4P0DMN0 295 aa18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 IL7P13232 177 aa18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 FCGR2BP31994 310 aaPredicted RBP18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 CCR6P51684 374 aa18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 UBE2MP61081 183 aaKnown RBP18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 LCN12Q6JVE5 192 aa18.51■□□□□ 0.55
SDF2L1-201ENST00000248958 ZNF320A2RRD8 509 aa18.5■□□□□ 0.55
SDF2L1-201ENST00000248958 C2orf70A6NJV1 201 aa18.5■□□□□ 0.55
SDF2L1-201ENST00000248958 I3L2K1 104 aa18.5■□□□□ 0.55
SDF2L1-201ENST00000248958 NDUFB6O95139 128 aa18.5■□□□□ 0.55
SDF2L1-201ENST00000248958 MFAP4P55083 255 aa18.5■□□□□ 0.55
SDF2L1-201ENST00000248958 Q56UQ5 140 aa18.5■□□□□ 0.55
SDF2L1-201ENST00000248958 ZNF436Q9C0F3 470 aaPredicted RBP18.5■□□□□ 0.55
SDF2L1-201ENST00000248958 IGHV3-21A0A0B4J1V1 117 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 OR2T8A6NH00 312 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 MT-CO2P00403 227 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 VAMP1P23763 118 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 ELLP55199 621 aaPredicted RBP18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 CNPY1Q3B7I2 92 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 PVRIGQ6DKI7 326 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 HAPLN4Q86UW8 402 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 LRTM2Q8N967 370 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 DYNLRB2Q8TF09 96 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 ZC4H2Q9NQZ6 224 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 TECRQ9NZ01 308 aaKnown RBP18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 PRR13Q9NZ81 148 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 SMAD5-AS1Q9Y6J3 95 aa18.49■□□□□ 0.55
SDF2L1-201ENST00000248958 SFT2D2O95562 160 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 RNASE2P10153 161 aaKnown RBP18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 FOLR2P14207 255 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 HTR2BP41595 481 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 SMCO1Q147U7 214 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 NMSQ5H8A3 153 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 LYZL2Q7Z4W2 148 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 UBAC2Q8NBM4 344 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 MARC2Q969Z3 335 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 PINX1Q96BK5 328 aaKnown RBP18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 B9D2Q9BPU9 175 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 UFC1Q9Y3C8 167 aa18.48■□□□□ 0.55
SDF2L1-201ENST00000248958 F8W735 103 aaPredicted RBP18.47■□□□□ 0.55
SDF2L1-201ENST00000248958 S100ZQ8WXG8 99 aa18.47■□□□□ 0.55
SDF2L1-201ENST00000248958 CCDC32Q9BV29 185 aa18.47■□□□□ 0.55
SDF2L1-201ENST00000248958 A0A1B0GU03 582 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 CEBPZOSA8MTT3 80 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 NDUFA4O00483 81 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 NUPL2O15504 423 aaKnown RBP18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 CBLN1P23435 193 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 RELQ04864 619 aaPredicted RBP18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 CD69Q07108 199 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 PPP1R1AQ13522 171 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 BSXQ3C1V8 233 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 ADAMTSL5Q6ZMM2 481 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 DUSP18Q8NEJ0 188 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 HIPK2Q9H2X6 1198 aa18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 HEYLQ9NQ87 328 aaPredicted RBP18.46■□□□□ 0.55
SDF2L1-201ENST00000248958 LINC00854A0A1B0GVQ3 168 aa18.45■□□□□ 0.54
SDF2L1-201ENST00000248958 TMEM213A2RRL7 107 aa18.45■□□□□ 0.54
SDF2L1-201ENST00000248958 NPBWR1P48145 328 aa18.45■□□□□ 0.54
SDF2L1-201ENST00000248958 DEFB114Q30KQ6 69 aa18.45■□□□□ 0.54
SDF2L1-201ENST00000248958 NOXA1Q86UR1 476 aa18.45■□□□□ 0.54
SDF2L1-201ENST00000248958 TMEM190Q8WZ59 177 aa18.45■□□□□ 0.54
SDF2L1-201ENST00000248958 MRPL27Q9P0M9 148 aaKnown RBP18.45■□□□□ 0.54
SDF2L1-201ENST00000248958 GNG7O60262 68 aa18.44■□□□□ 0.54
SDF2L1-201ENST00000248958 SLC25A6P12236 298 aa18.44■□□□□ 0.54
SDF2L1-201ENST00000248958 UNQ9165/PRO28630Q6UXU0 137 aa18.44■□□□□ 0.54
SDF2L1-201ENST00000248958 CHRDL1Q9BU40 450 aa18.44■□□□□ 0.54
SDF2L1-201ENST00000248958 BATF3Q9NR55 127 aa18.44■□□□□ 0.54
SDF2L1-201ENST00000248958 HSPB7Q9UBY9 170 aa18.44■□□□□ 0.54
SDF2L1-201ENST00000248958 TMED3Q9Y3Q3 217 aa18.44■□□□□ 0.54
SDF2L1-201ENST00000248958 CTSGP08311 255 aa18.43■□□□□ 0.54
SDF2L1-201ENST00000248958 C8orf88P0DMB2 117 aa18.43■□□□□ 0.54
SDF2L1-201ENST00000248958 ADMP35318 185 aa18.43■□□□□ 0.54
SDF2L1-201ENST00000248958 TNFRSF9Q07011 255 aa18.43■□□□□ 0.54
SDF2L1-201ENST00000248958 ANKRD55Q3KP44 614 aa18.43■□□□□ 0.54
SDF2L1-201ENST00000248958 CD300EQ496F6 205 aaPredicted RBP18.43■□□□□ 0.54
SDF2L1-201ENST00000248958 C2orf83Q53S99 150 aa18.43■□□□□ 0.54
SDF2L1-201ENST00000248958 IGHV3-35A0A0C4DH35 117 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 RPS10-NUDT3A0A1W2PQS6 291 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 K7EMT4 169 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 LYRM1O43325 122 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 BTCP35070 178 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 TM4SF20Q53R12 229 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 GTSCR1Q86UQ5 136 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 UXS1Q8NBZ7 420 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 SLC24A4Q8NFF2 622 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 OR1S1Q8NH92 325 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 PTTG2Q9NZH5 202 aa18.42■□□□□ 0.54
SDF2L1-201ENST00000248958 SCGB2A1O75556 95 aa18.41■□□□□ 0.54
SDF2L1-201ENST00000248958 OPRK1P41145 380 aa18.41■□□□□ 0.54
SDF2L1-201ENST00000248958 RNASEH2CQ8TDP1 164 aaKnown RBP18.41■□□□□ 0.54
SDF2L1-201ENST00000248958 DAZ1Q9NQZ3 744 aaKnown RBP18.41■□□□□ 0.54
SDF2L1-201ENST00000248958 U3KQ87 197 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms