RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF57Q68EA5 555 aaPredicted RBP9.69□□□□□ -0.86
VPREB3-201ENST00000248948 PVRIGQ6DKI7 326 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 MISP3Q96FF7 219 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 TXN2Q99757 166 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 PALMDQ9NP74 551 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 ENY2Q9NPA8 101 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 ZC4H2Q9NQZ6 224 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.69□□□□□ -0.86
VPREB3-201ENST00000248948 TECRQ9NZ01 308 aaKnown RBP9.69□□□□□ -0.86
VPREB3-201ENST00000248948 CACNG5Q9UF02 275 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 SHPKQ9UHJ6 478 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 UFC1Q9Y3C8 167 aa9.69□□□□□ -0.86
VPREB3-201ENST00000248948 OR2T8A6NH00 312 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 I3L2K1 104 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 FOLR2P14207 255 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 SUB1P53999 127 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPREB3-201ENST00000248948 SPCS3P61009 180 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 BSXQ3C1V8 233 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 Q56UQ5 140 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 SPINK9Q5DT21 86 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 NMSQ5H8A3 153 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 ADAMTSL5Q6ZMM2 481 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 Q6ZRM9 215 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 LINC00299Q6ZSB3 139 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 TMED4Q7Z7H5 227 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 LGI3Q8N145 548 aa9.68□□□□□ -0.86
VPREB3-201ENST00000248948 C7orf50Q9BRJ6 194 aaKnown RBP9.68□□□□□ -0.86
VPREB3-201ENST00000248948 NDUFA4O00483 81 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 MT-CO2P00403 227 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 NHLRC4P0CG21 123 aaPredicted RBP9.67□□□□□ -0.86
VPREB3-201ENST00000248948 SULT1A3P0DMM9 295 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 SULT1A4P0DMN0 295 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 RNASE2P10153 161 aaKnown RBP9.67□□□□□ -0.86
VPREB3-201ENST00000248948 CBLN1P23435 193 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 UBE2MP61081 183 aaKnown RBP9.67□□□□□ -0.86
VPREB3-201ENST00000248948 RELQ04864 619 aaPredicted RBP9.67□□□□□ -0.86
VPREB3-201ENST00000248948 BAK1Q16611 211 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 UNQ9165/PRO28630Q6UXU0 137 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 LRTM2Q8N967 370 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 UBAC2Q8NBM4 344 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 GPR146Q96CH1 333 aa9.67□□□□□ -0.86
VPREB3-201ENST00000248948 DAZ1Q9NQZ3 744 aaKnown RBP9.67□□□□□ -0.86
VPREB3-201ENST00000248948 ZNF320A2RRD8 509 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 CENPXA8MT69 81 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 A8MZ25 164 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 NUPL2O15504 423 aaKnown RBP9.66□□□□□ -0.86
VPREB3-201ENST00000248948 C8orf88P0DMB2 117 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 IL7P13232 177 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 ADMP35318 185 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 HTR2BP41595 481 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 CCR6P51684 374 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 MFAP4P55083 255 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 SMCO1Q147U7 214 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 DEFB114Q30KQ6 69 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 CD300EQ496F6 205 aaPredicted RBP9.66□□□□□ -0.86
VPREB3-201ENST00000248948 CACNG8Q8WXS5 425 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 SDHCQ99643 169 aaPredicted RBP9.66□□□□□ -0.86
VPREB3-201ENST00000248948 PRR13Q9NZ81 148 aa9.66□□□□□ -0.86
VPREB3-201ENST00000248948 MRPL27Q9P0M9 148 aaKnown RBP9.66□□□□□ -0.86
VPREB3-201ENST00000248948 STAB2Q8WWQ8 2551 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 IGHV3-21A0A0B4J1V1 117 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 C15orf62A8K5M9 175 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 GNG7O60262 68 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 NDUFB6O95139 128 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 CTSGP08311 255 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 EDN2P20800 178 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 VAMP1P23763 118 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 NPBWR1P48145 328 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 Q8N1Y9 231 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 SLC24A4Q8NFF2 622 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 PINX1Q96BK5 328 aaKnown RBP9.65□□□□□ -0.86
VPREB3-201ENST00000248948 CHRDL1Q9BU40 450 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 MLXQ9UH92 298 aa9.65□□□□□ -0.86
VPREB3-201ENST00000248948 A0A1B0GU03 582 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 IZUMO1RA6ND01 250 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 K7EMT4 169 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 SCGB2A1O75556 95 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 SFT2D2O95562 160 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 FRMD6-AS1P0C7T7 363 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 SLC25A6P12236 298 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 OPRK1P41145 380 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 PPP1R1AQ13522 171 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 C2orf83Q53S99 150 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 BTNL8Q6UX41 500 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 LYZL2Q7Z4W2 148 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 UXS1Q8NBZ7 420 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 DUSP18Q8NEJ0 188 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
VPREB3-201ENST00000248948 HEYLQ9NQ87 328 aaPredicted RBP9.64□□□□□ -0.87
VPREB3-201ENST00000248948 TMED3Q9Y3Q3 217 aa9.64□□□□□ -0.87
VPREB3-201ENST00000248948 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 IGHV3-35A0A0C4DH35 117 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms