RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 REG1AP05451 166 aa20.73■□□□□ 0.91
RAB40C-201ENST00000248139 COMMD5Q9GZQ3 224 aa20.73■□□□□ 0.91
RAB40C-201ENST00000248139 ZNF257Q9Y2Q1 563 aa20.73■□□□□ 0.91
RAB40C-201ENST00000248139 CRYABP02511 175 aaKnown RBP20.73■□□□□ 0.91
RAB40C-201ENST00000248139 APELAP0DMC3 54 aa20.73■□□□□ 0.91
RAB40C-201ENST00000248139 RITA1Q96K30 269 aa20.73■□□□□ 0.91
RAB40C-201ENST00000248139 LINC00574Q9H8X3 128 aa20.73■□□□□ 0.91
RAB40C-201ENST00000248139 H0YJW9 148 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 DNLZQ5SXM8 178 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 IGHV3-72A0A0B4J1Y9 119 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 A8MWP6 167 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 C16orf97H3BN30 126 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 THBDP07204 575 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 GNG4P50150 75 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 ZNF833PQ6ZTB9 187 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 OR1L6Q8NGR2 347 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 C11orf52Q96A22 123 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 ZNF714Q96N38 554 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 MRPL18Q9H0U6 180 aaKnown RBP20.72■□□□□ 0.91
RAB40C-201ENST00000248139 SAP30LQ9HAJ7 183 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 SVEP1Q4LDE5 3571 aa20.72■□□□□ 0.91
RAB40C-201ENST00000248139 GCGP01275 180 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 C3orf36Q3SXR2 165 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 MMD2Q8IY49 270 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 TPSG1Q9NRR2 321 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 NKX6-3A6NJ46 265 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 RNF224P0DH78 156 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 IGF2-ASQ6U949 168 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 V9GYV3 84 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 LGALS4P56470 323 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 CD69Q07108 199 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 C2orf83Q53S99 150 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 C19orf35Q6ZS72 473 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 OR10X1Q8NGY0 326 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 ABHD17AQ96GS6 310 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 BET1LQ9NYM9 111 aa20.71■□□□□ 0.91
RAB40C-201ENST00000248139 TECRQ9NZ01 308 aaKnown RBP20.71■□□□□ 0.91
RAB40C-201ENST00000248139 TLN1Q9Y490 2541 aaKnown RBP20.7■□□□□ 0.9
RAB40C-201ENST00000248139 AREGP15514 252 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 LINC00310P59036 64 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 RPL8P62917 257 aaKnown RBP20.7■□□□□ 0.9
RAB40C-201ENST00000248139 WT1-ASQ06250 92 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 MRPL36Q9P0J6 103 aaKnown RBP20.7■□□□□ 0.9
RAB40C-201ENST00000248139 MUC6Q6W4X9 2439 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 FCN1O00602 326 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 PLAUP00749 431 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 CA1P00915 261 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-201ENST00000248139 PYYP10082 97 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 TNFRSF1AP19438 455 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 YPEL3P61236 119 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-201ENST00000248139 KIAA1644Q3SXP7 199 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 RUSC1-AS1Q66K80 236 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 FLYWCH2Q96CP2 140 aaKnown RBP20.7■□□□□ 0.9
RAB40C-201ENST00000248139 GAL3ST2Q9H3Q3 398 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 FNDC4Q9H6D8 234 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-201ENST00000248139 NDUFA4L2Q9NRX3 87 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 FKBP11Q9NYL4 201 aa20.7■□□□□ 0.9
RAB40C-201ENST00000248139 NBASA2RRP1 2371 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 CGB1A6NKQ9 187 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 APOA2P02652 100 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 MGST1P10620 155 aaKnown RBP20.69■□□□□ 0.9
RAB40C-201ENST00000248139 ST6GALNAC3Q8NDV1 305 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 MISP3Q96FF7 219 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 SNURFLB1AK76 121 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 NUP37Q8NFH4 326 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 OR5B3Q8NH48 314 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 CTSZQ9UBR2 303 aa20.69■□□□□ 0.9
RAB40C-201ENST00000248139 PPIAL4EA0A075B759 164 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 PPIAL4DF5H284 164 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 PPIAL4FP0DN26 164 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 MS4A10Q96PG2 267 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 PPIAL4AQ9Y536 164 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 C9JCJ5 164 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 SLC25A33Q9BSK2 321 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 TMEM167BQ9NRX6 74 aa20.68■□□□□ 0.9
RAB40C-201ENST00000248139 RPEL1Q2QD12 228 aa20.67■□□□□ 0.9
RAB40C-201ENST00000248139 PRR30Q53SZ7 412 aaPredicted RBP20.67■□□□□ 0.9
RAB40C-201ENST00000248139 CMTM2Q8TAZ6 248 aa20.67■□□□□ 0.9
RAB40C-201ENST00000248139 NPIPB3Q92617 1050 aa20.67■□□□□ 0.9
RAB40C-201ENST00000248139 SERF1AO75920 110 aa20.67■□□□□ 0.9
RAB40C-201ENST00000248139 OR5AN1Q8NGI8 311 aa20.67■□□□□ 0.9
RAB40C-201ENST00000248139 SLC35E1Q96K37 410 aa20.67■□□□□ 0.9
RAB40C-201ENST00000248139 TMEM178BH3BS89 294 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 PRRG2O14669 202 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 OR5G3P0C626 314 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 PAX1P15863 534 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 ZNF600Q6ZNG1 722 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 OR1L8Q8NGR8 309 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 OSR1Q8TAX0 266 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-201ENST00000248139 ZNF430Q9H8G1 570 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-201ENST00000248139 SERTAD4Q9NUC0 356 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 IGHV3-21A0A0B4J1V1 117 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 MKRN2OSH3BPM6 223 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 SLC25A17O43808 307 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 CRISP2P16562 243 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 BTF3L4Q96K17 158 aa20.66■□□□□ 0.9
RAB40C-201ENST00000248139 ABCA4P78363 2273 aa20.65■□□□□ 0.9
RAB40C-201ENST00000248139 ERHP84090 104 aaKnown RBP20.65■□□□□ 0.9
RAB40C-201ENST00000248139 USF2Q15853 346 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-201ENST00000248139 OR5AU1Q8NGC0 362 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms