RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 FOXA2Q9Y261 457 aaPredicted RBP16.59■□□□□ 0.25
SOX4-201ENST00000244745 NAPSAO96009 420 aa16.59■□□□□ 0.25
SOX4-201ENST00000244745 RAXQ9Y2V3 346 aa16.59■□□□□ 0.25
SOX4-201ENST00000244745 BEX4Q9NWD9 120 aaPredicted RBP16.59■□□□□ 0.25
SOX4-201ENST00000244745 SOX21Q9Y651 276 aaPredicted RBP16.59■□□□□ 0.25
SOX4-201ENST00000244745 SAA1P0DJI8 122 aaPredicted RBP16.58■□□□□ 0.25
SOX4-201ENST00000244745 ACTL10Q5JWF8 245 aa16.58■□□□□ 0.25
SOX4-201ENST00000244745 OCC1Q8TAD7 63 aa16.58■□□□□ 0.25
SOX4-201ENST00000244745 GPR82Q96P67 336 aa16.58■□□□□ 0.25
SOX4-201ENST00000244745 TTC9CQ8N5M4 171 aa16.58■□□□□ 0.25
SOX4-201ENST00000244745 GNB1LQ9BYB4 327 aa16.58■□□□□ 0.25
SOX4-201ENST00000244745 C1orf162Q8NEQ5 155 aaPredicted RBP16.58■□□□□ 0.24
SOX4-201ENST00000244745 PNRC2Q9NPJ4 139 aaKnown RBP16.58■□□□□ 0.24
SOX4-201ENST00000244745 AMMECR1LQ6DCA0 310 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 Q9H3A6 140 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 IGHV3OR16-13A0A075B7E8 117 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 IGHV3-74A0A0B4J1X5 117 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 C15orf61A6NNL5 157 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 SCGB1A1P11684 91 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 WDR82Q6UXN9 313 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 C9orf106Q8NAJ2 232 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 FOXC2Q99958 501 aa16.58■□□□□ 0.24
SOX4-201ENST00000244745 OR11H12B2RN74 326 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 MORN2Q502X0 79 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 DNM1P46Q6ZS02 220 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 BEND2Q8NDZ0 799 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 OR11H1Q8NG94 326 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 OR11H2Q8NH07 326 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 GPX1P07203 203 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 C5orf24Q7Z6I8 188 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 C5orf30Q96GV9 206 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 ELOVL5Q9NYP7 299 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 QRFPP83859 136 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 LINC01560Q8TB33 94 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 A0A1B0GUT8 65 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 LY6EQ16553 131 aa16.57■□□□□ 0.24
SOX4-201ENST00000244745 VWA8A3KMH1 1905 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 NEUROG1Q92886 237 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 LINC00614P0C842 121 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 HGFACQ04756 655 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 UPK2O00526 184 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 TSPAN13O95857 204 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 TYMSP04818 313 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 ZNF664Q8N3J9 261 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 SRSF4Q08170 494 aaKnown RBP16.56■□□□□ 0.24
SOX4-201ENST00000244745 EEF1AKMT3Q96AZ1 226 aa16.56■□□□□ 0.24
SOX4-201ENST00000244745 YPEL1O60688 119 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 PRSS8Q16651 343 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 YPEL2Q96QA6 119 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 SEC16AO15027 2179 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 TEX38Q6PEX7 206 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 FAM90A1Q86YD7 464 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 IGHV3OR16-10A0A075B7F0 116 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 GTF3AQ92664 365 aaKnown RBP16.55■□□□□ 0.24
SOX4-201ENST00000244745 CACNA1IQ9P0X4 2223 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 RNASEH2CQ8TDP1 164 aaKnown RBP16.55■□□□□ 0.24
SOX4-201ENST00000244745 ZNF581Q9P0T4 197 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 PRSS2P07478 247 aa16.55■□□□□ 0.24
SOX4-201ENST00000244745 PRB3Q04118 309 aaPredicted RBP16.55■□□□□ 0.24
SOX4-201ENST00000244745 NPPCP23582 126 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 BSPH1Q075Z2 132 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 FHL1Q13642 323 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 B9A039 149 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 TMEM144Q7Z5S9 345 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 IGKV1D-33P01593 117 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 IGKV1-33P01594 117 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 DOCK6Q96HP0 2047 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 IGHV3-49A0A0A0MS15 119 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 CACNG8Q8WXS5 425 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 OSTCQ9NRP0 149 aa16.54■□□□□ 0.24
SOX4-201ENST00000244745 TGFAP01135 160 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 CCL3L1P16619 93 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 FOXG1P55316 489 aaPredicted RBP16.53■□□□□ 0.24
SOX4-201ENST00000244745 EREGO14944 169 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 PYYP10082 97 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 GGNQ86UU5 652 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 EFNB3Q15768 340 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 FAM74A4Q5TZK3 123 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 TMEM256Q8N2U0 113 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 LINC00312Q9Y6C7 94 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 SRSF7Q16629 238 aaKnown RBP eCLIP16.53■□□□□ 0.24
SOX4-201ENST00000244745 APOBEC3AP31941 199 aaPredicted RBP16.53■□□□□ 0.24
SOX4-201ENST00000244745 SPRR3Q9UBC9 169 aa16.53■□□□□ 0.24
SOX4-201ENST00000244745 CLEC2AQ6UVW9 174 aa16.52■□□□□ 0.24
SOX4-201ENST00000244745 ZNF257Q9Y2Q1 563 aa16.52■□□□□ 0.24
SOX4-201ENST00000244745 MST1LQ2TV78 715 aa16.52■□□□□ 0.23
SOX4-201ENST00000244745 NDUFA3O95167 84 aa16.52■□□□□ 0.23
SOX4-201ENST00000244745 DUTP33316 252 aaKnown RBP16.52■□□□□ 0.23
SOX4-201ENST00000244745 CHODLQ9H9P2 273 aa16.52■□□□□ 0.23
SOX4-201ENST00000244745 TRAV1-1A0A0B4J248 108 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 PRR19A6NJB7 356 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 LYL1P12980 280 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 TDGF1P3P51864 188 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 ORAOV1Q8WV07 137 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 BRWD1Q9NSI6 2320 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 IGHV3OR16-8A0A075B7F1 116 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 GZMBP10144 247 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 WDR81Q562E7 1941 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 TIMP3P35625 211 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 MEF2CQ06413 473 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms