RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 HIST1H2BJP06899 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST1H2BOP23527 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST1H2BBP33778 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST1H2BDP58876 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST1H2BCP62807 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 RPL23P62829 140 aaKnown RBP13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST2H2BEQ16778 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 LYG1Q8N1E2 194 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 ZNF439Q8NDP4 499 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST1H2BHQ93079 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST1H2BNQ99877 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 HIST1H2BMQ99879 126 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 TCEAL7Q9BRU2 100 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 TMEM133Q9H2Q1 129 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 SPNS3Q6ZMD2 512 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 TMEM186Q96B77 213 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 RHOVQ96L33 236 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 SIRPDQ9H106 197 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 RAB9BQ9NP90 201 aa13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 POLR3KQ9Y2Y1 108 aaPredicted RBP13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 TET2Q6N021 2002 aaPredicted RBP13.66□□□□□ -0.22
CDKN1A-201ENST00000244741 IFITM10A6NMD0 228 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 C15orf61A6NNL5 157 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 OPN1MWP04001 364 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 OPN1MW2P0DN77 364 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 OPN1MW3P0DN78 364 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 THBS3P49746 956 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 BSXQ3C1V8 233 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 OR4A47Q6IF82 309 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 C16orf82Q7Z2V1 217 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 TBX15Q96SF7 602 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 MGST2Q99735 147 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 GGACTQ9BVM4 153 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 TRBV24-1A0A075B6N3 115 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 IGHV2-26A0A0B4J1V2 119 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 M0R1W7 72 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 NPPCP23582 126 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 OR13D1Q8NGV5 346 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 ABHD5Q8WTS1 349 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 C1orf159Q96HA4 380 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
CDKN1A-201ENST00000244741 MPDU1O75352 247 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 MYOD1P15172 320 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 OPRK1P41145 380 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 CDX1P47902 265 aaPredicted RBP13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 S100A12P80511 92 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 FRZBQ92765 325 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 C11orf94C9JXX5 98 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 AVPP01185 164 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 PRTN3P24158 256 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 PAX8Q06710 450 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 DIAPH2-AS1Q14236 149 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 HCP5Q6MZN7 132 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 OR10A7Q8NGE5 316 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 TNFRSF14Q92956 283 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 GGTLC1Q9BX51 225 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 TMEM14BQ9NUH8 114 aa13.64□□□□□ -0.23
CDKN1A-201ENST00000244741 A0A1W2PPV4 95 aa13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 J3QR06 171 aa13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 NDUFS6O75380 124 aaKnown RBP13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 HOXB4P17483 251 aaPredicted RBP13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 REG1BP48304 166 aa13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 HSPE1P61604 102 aaKnown RBP13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 MIC13Q5XKP0 118 aa13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 OR10X1Q8NGY0 326 aa13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 FOXA2Q9Y261 457 aaPredicted RBP13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
CDKN1A-201ENST00000244741 PHOX2AO14813 284 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 TRGC1P0CF51 173 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 UBE2G2P60604 165 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 SLC25A48Q6ZT89 311 aaKnown RBP13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 KIR3DL3Q8N743 410 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 NECAP1Q8NC96 275 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 ADTRPQ96IZ2 230 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 CLEC7AQ9BXN2 247 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 MXRA5Q9NR99 2828 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 RBP4P02753 201 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 ARSJQ5FYB0 599 aaPredicted RBP13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 OR51G1Q8NGK1 321 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 OR9G1Q8NH87 305 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 LSM4Q9Y4Z0 139 aaKnown RBP13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 HIVEP1P15822 2718 aa13.62□□□□□ -0.23
CDKN1A-201ENST00000244741 TRAV20A0A0B4J274 112 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 CT45A6P0DMU7 189 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 CT45A5P0DMU8 189 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 CT45A7P0DMV0 189 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 ATP5G3P48201 142 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 LDLRAD2Q5SZI1 272 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 GFI1BQ5VTD9 330 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 CYB5R2Q6BCY4 276 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 LHFPL4Q7Z7J7 247 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 SSMEM1Q8WWF3 244 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 SMR3AQ99954 134 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 A0A087X0M5 115 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 A0A1B0GX30 115 aa13.61□□□□□ -0.23
CDKN1A-201ENST00000244741 SOX15O60248 233 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms